Evidence map›Paper›PMID 30398377›Full record

ArticleEnvironmental health perspectives2018

Signaling Events Downstream of AHR Activation That Contribute to Toxic Responses: The Functional Role of an AHR-Dependent Long Noncoding RNA (

Gloria R Garcia, Prarthana Shankar, Cheryl L Dunham, Abraham Garcia, Jane K La Du, Lisa Truong, Susan C Tilton, Robert L Tanguay

Open access · diamondAbstract read
In one paragraph

Article in Environmental health perspectives, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 37 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. The Ahr2-Dependent wfikkn1 Gene Influences Zebrafish Transcriptome, Proteome, and Behavior.Toxicological sciences : an official journal of the Society of Toxicology · 2022
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. A Review of the Functional Roles of the Zebrafish Aryl Hydrocarbon Receptors.Toxicological sciences : an official journal of the Society of Toxicology · 2020
    Review
  17. Aryl Hydrocarbon Receptor Mediates Larval Zebrafish Fin Duplication Following Exposure to Benzofluoranthenes.Toxicological sciences : an official journal of the Society of Toxicology · 2020
    Article
  18. Article
  19. Use of Zebrafish in Drug Discovery Toxicology.Chemical research in toxicology · 2020
    Review
  20. Mechanisms of Developmental Toxicity of Dioxins and Related Compounds.International journal of molecular sciences · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Gloria R GarciaDepartment of Environmental and Molecular Toxicology, Sinnhuber Aquatic Research Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon, USA.
Prarthana ShankarDepartment of Environmental and Molecular Toxicology, Sinnhuber Aquatic Research Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon, USA.
Cheryl L DunhamDepartment of Environmental and Molecular Toxicology, Sinnhuber Aquatic Research Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon, USA.
Abraham GarciaDepartment of Environmental and Molecular Toxicology, Sinnhuber Aquatic Research Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon, USA.
Jane K La DuDepartment of Environmental and Molecular Toxicology, Sinnhuber Aquatic Research Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon, USA.
Lisa TruongDepartment of Environmental and Molecular Toxicology, Sinnhuber Aquatic Research Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon, USA.
Susan C TiltonDepartment of Environmental and Molecular Toxicology, Sinnhuber Aquatic Research Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon, USA.
Robert L TanguayDepartment of Environmental and Molecular Toxicology, Sinnhuber Aquatic Research Laboratory, Environmental Health Sciences Center, Oregon State University, Corvallis, Oregon, USA.
Oregon State University · US

Funding

Research Experience and Training Coordination CoreP42ES016465 · NIEHS · OREGON STATE UNIVERSITY · PI Robyn L Tanguay · 2009 to 2026
$52.5M
Reducing Susceptibility to Environmental Stress Throughout the Life SpanP30ES000210 · NIEHS · OREGON STATE UNIVERSITY · PI BECKMAN, JOSEPH S · 1985 to 2015
$21.4M
MODE OF ACTION OF ENVIRONMENTAL TOXICANTST32ES007060 · NIEHS · OREGON STATE UNIVERSITY · PI Jamie DeWitt, Siva Kumar Kolluri · 1985 to 2026
$11.6M
Conserved AHR-dependent control of Sox9 long non coding RNA expressionR21ES025421 · NIEHS · OREGON STATE UNIVERSITY · PI TANGUAY, ROBYN L · 2015 to 2016
$378k
A conserved long non-coding RNA suppresses Sox9b in AHR target organ toxicityF31ES026518 · NIEHS · OREGON STATE UNIVERSITY · PI GARCIA, GLORIA RENE · 2016 to 2017
$72k
NIEHS NIH HHS F31 ES026518NIEHS NIH HHS P30 ES000210NIEHS NIH HHS P42 ES016465NIEHS NIH HHS R21 ES025421NIEHS NIH HHS T32 ES007060
6 · The paper itself

Abstract

backgroundA structurally diverse group of chemicals, including dioxins [e.g., 2,3,7,8-tetrachlorodibenzo-

objectiveUsing the zebrafish model, we aimed to enhance our understanding of the signaling events downstream of AHR activation that contribute to toxic responses by identifying:

methodsWe used capture hybridization analysis of RNA targets (CHART), qRT-PCR, RNA sequencing, morphometric analysis of cartilage structures, and hemorrhaging screens.

resultsThe

conclusionOur study establishes that in zebrafish,

Indexed as

AnimalsCartilageEmbryo, NonmammalianHumansPolychlorinated DibenzodioxinsPolycyclic Aromatic HydrocarbonsReceptors, Aryl HydrocarbonRNA, Long NoncodingSignal TransductionSOX9 Transcription FactorZebrafishZebrafish ProteinsPolychlorinated DibenzodioxinsPolycyclic Aromatic HydrocarbonsReceptors, Aryl HydrocarbonRNA, Long NoncodingSox9b protein, zebrafishSOX9 Transcription FactorZebrafish Proteins

Identifiers

PMID30398377
PMCPMC6371766
OpenAlexW2900059139

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.