Evidence map›Paper›PMID 30405162›Full record

ArticleScientific reports2018

Conserved Noncoding Sequences Boost ADR1 and SP1 Regulated Human Swiprosin-1 Promoter Activity.

Ramesh P Thylur, Sung Yong Ahn, Eunhea Jung, Chang-Duk Jun, Young-Min Hyun

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Ramesh P ThylurSchool of Life Sciences, Gwangju Institute of Science and Technology (GIST), Gwangju, 61005, Korea.
Sung Yong AhnDepartment of Anatomy, Yonsei University College of Medicine, Seoul, 03722, Korea.
Eunhea JungDepartment of Anatomy, Yonsei University College of Medicine, Seoul, 03722, Korea.
Chang-Duk JunSchool of Life Sciences, Gwangju Institute of Science and Technology (GIST), Gwangju, 61005, Korea. cdjun@gist.ac.kr.
Young-Min HyunDepartment of Anatomy, Yonsei University College of Medicine, Seoul, 03722, Korea. ymhyun@yuhs.ac.ORCID http://orcid.org/0000-0002-0567-2039
Yonsei University · KRGwangju Institute of Science and Technology · KRPennsylvania State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Swiprosin-1 is expressed in various types of cells or tissues of different species. To investigate the mechanisms underlying Swiprosin-1 expression pattern, we analyzed the promoter activity of 2-kilobase genomic sequences located at 5' flanking region of the Swiprosin-1 gene. The -2000/+41 bp of 5' flanking untranslated promoter region of Swiprosin-1 gene was constitutively transactivated without significant effect of PMA, A23187, or PMA/A23187 stimulation in Jurkat T cells. Further, we identified 5' deletant of proximal promoter region (-100/+41 to -70/+41) plays a pivotal role in activating the Swiprosin-1 gene in Jurkat T cells. Our studies also verified that ADR1 and Sp1 transcription factors were located between -70 and -100 locus of 5' flanking proximal promoter region, which is critical for the Swiprosin-1 promoter activity. ADR1 and Sp1 were shown to bind the regions of -82, -79, -76, -73 and -70 and; -79, -78 and -77, respectively, within the proximal promoter region of Swiprosin-1. Finally conserved noncoding sequences (CNS) -1, -2 and -3 were located between the exon 1 and exon 2 of Swiprosin-1 gene and synergistically transactivated the Swiprosin-1 promoter. In summary, Swiprosin-1 was constitutively expressed in Jurkat T cells by the coordinate action of ADR1 and SP1 transcription factors at the transcriptional level and CNS further boost the proximal region of Swiprosin-1 promoter activity. Our findings provide novel insights that the transcriptional regulation of Swiprosin-1 by targeting ADR1 and Sp1 binding sites may be helpful in exploring novel therapeutic strategies for advanced immune or other disorders.

Indexed as

Conserved SequenceGene Expression RegulationPromoter Regions, GeneticUntranslated RegionsBase SequenceBinding SitesCalcium-Binding ProteinsCell LineHumansProtein BindingSp1 Transcription FactorTranscriptional ActivationCalcium-Binding ProteinsEFHD2 protein, humanSp1 Transcription FactorUntranslated Regions

Identifiers

PMID30405162
PMCPMC6220333
OpenAlexW2899285673

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.