Evidence map›Paper›PMID 30420356›Full record

ArticleMolecular and cellular biology2019

Nuclear Phosphatidylinositol 5-Phosphatase Is Essential for Allelic Exclusion of Variant Surface Glycoprotein Genes in Trypanosomes.

Igor Cestari, Hilary McLeland-Wieser, Kenneth Stuart

Abstract read
In one paragraph

Article in Molecular and cellular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Microbiology spectrum · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Regulation of Antigenic Variation byPathogens (Basel, Switzerland) · 2021
    Review
  11. Article
  12. TheFrontiers in cellular and infection microbiology · 2021
    Article
  13. Review
  14. Review
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Igor CestariCenter for Infectious Disease Research, Seattle, Washington, USA igor.cestari@mcgill.ca Ken.Stuart@seattlechildrens.org.
Hilary McLeland-WieserCenter for Infectious Disease Research, Seattle, Washington, USA.
Kenneth StuartCenter for Infectious Disease Research, Seattle, Washington, USA igor.cestari@mcgill.ca Ken.Stuart@seattlechildrens.org.
Center for Infectious Disease Research · US

Funding

MITOCHONDRIAL DNA OF NORMAL AND MUTANT TRYPANOSOMESR01AI014102 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI KENNETH D STUART · 1985 to 2026
$20.9M
Genome wide assessment of essential genes in Trypanosoma bruceiR01AI078962 · NIAID · SEATTLE BIOMEDICAL RESEARCH INSTITUTE · PI STUART, KENNETH D · 2010 to 2012
$2.5M
NIAID NIH HHS R01 AI014102NIAID NIH HHS R01 AI078962
6 · The paper itself

Abstract

Allelic exclusion of variant surface glycoprotein (VSG) genes is essential for African trypanosomes to evade the host antibody response by antigenic variation. The mechanisms by which this parasite expresses only one of its ∼2,000 VSG genes at a time are unknown. We show that nuclear phosphatidylinositol 5-phosphatase (PIP5Pase) interacts with repressor activator protein 1 (RAP1) in a multiprotein complex and functions in the control of VSG allelic exclusion. RAP1 binds PIP5Pase substrate phosphatidylinositol 3,4,5-trisphosphate [PI(3,4,5)P3], and catalytic mutation of PIP5Pase that inhibits PI(3,4,5)P3 dephosphorylation results in simultaneous transcription of VSGs from all telomeric expression sites (ESs) and from silent subtelomeric VSG arrays. PIP5Pase and RAP1 bind to telomeric ESs, especially at 70-bp repeats and telomeres, and their binding is altered by PIP5Pase inactivation or knockdown, implying changes in ES chromatin organization. Our data suggest a model whereby PIP5Pase controls PI(3,4,5)P3 binding by RAP1 and, thus, RAP1 silencing of telomeric and subtelomeric VSG genes. Hence, allelic exclusion of VSG genes may entail control of nuclear phosphoinositides.

Indexed as

AllelesAnimalsAntigenic VariationGene Expression RegulationInositol PhosphatesMembrane GlycoproteinsPhosphatidylinositol PhosphatesPhosphatidylinositolsPhosphoric Monoester HydrolasesProtozoan ProteinsTelomereTranscription, GeneticTrypanosomaTrypanosoma brucei bruceiVariant Surface Glycoproteins, TrypanosomaInositol PhosphatesMembrane Glycoproteinsphosphatidylinositol 3,4,5-triphosphatephosphatidylinositol 5-phosphatePhosphatidylinositol PhosphatesPhosphatidylinositolsPhosphoric Monoester HydrolasesProtozoan ProteinsVariant Surface Glycoproteins, Trypanosomaallelic exclusionantigenic variationgene regulationinositol phosphatesphosphatidylinositolRNA polymerase Itelomere silencingtranscriptional controltrypanosomesvariant surface glycoprotein

Identifiers

PMID30420356
PMCPMC6336139
OpenAlexW2900430493

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.