Evidence map›Paper›PMID 30420655›Full record

ArticleNature communications2018

REX1 is the critical target of RNF12 in imprinted X chromosome inactivation in mice.

Cristina Gontan, Hegias Mira-Bontenbal, Aristea Magaraki, Catherine Dupont, Tahsin Stefan Barakat, Eveline Rentmeester, Jeroen Demmers, Joost Gribnau

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Roles of the Rlim-Rex1 axis during X chromosome inactivation in mice.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
  12. Review
  13. Article
  14. Epigenetic Reprogramming and Somatic Cell Nuclear Transfer.Methods in molecular biology (Clifton, N.J.) · 2023
    Review
  15. Article
  16. Article
  17. The Molecular and Nuclear Dynamics of X-Chromosome Inactivation.Cold Spring Harbor perspectives in biology · 2022
    Review
  18. Gene regulation in time and space during X-chromosome inactivation.Nature reviews. Molecular cell biology · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Cristina GontanDepartment of Developmental Biology, Oncode Institute, Erasmus MC, PO Box 2040, 3000, CA, Rotterdam, The Netherlands.
Hegias Mira-BontenbalDepartment of Developmental Biology, Oncode Institute, Erasmus MC, PO Box 2040, 3000, CA, Rotterdam, The Netherlands.
Aristea MagarakiDepartment of Developmental Biology, Oncode Institute, Erasmus MC, PO Box 2040, 3000, CA, Rotterdam, The Netherlands.
Catherine DupontDepartment of Developmental Biology, Oncode Institute, Erasmus MC, PO Box 2040, 3000, CA, Rotterdam, The Netherlands.
Tahsin Stefan BarakatDepartment of Developmental Biology, Oncode Institute, Erasmus MC, PO Box 2040, 3000, CA, Rotterdam, The Netherlands.
Eveline RentmeesterDepartment of Developmental Biology, Oncode Institute, Erasmus MC, PO Box 2040, 3000, CA, Rotterdam, The Netherlands.
Jeroen DemmersCenter for Proteomics, Erasmus MC, PO Box 2040, 3000, CA, Rotterdam, The Netherlands.
Joost GribnauDepartment of Developmental Biology, Oncode Institute, Erasmus MC, PO Box 2040, 3000, CA, Rotterdam, The Netherlands. j.gribnau@erasmusmc.nl.
Erasmus MC · NLOncode Institute · NLErasmus University Rotterdam · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mice, imprinted X chromosome inactivation (iXCI) of the paternal X in the pre-implantation embryo and extraembryonic tissues is followed by X reactivation in the inner cell mass (ICM) of the blastocyst to facilitate initiation of random XCI (rXCI) in all embryonic tissues. RNF12 is an E3 ubiquitin ligase that plays a key role in XCI. RNF12 targets pluripotency protein REX1 for degradation to initiate rXCI in embryonic stem cells (ESCs) and loss of the maternal copy of Rnf12 leads to embryonic lethality due to iXCI failure. Here, we show that loss of Rex1 rescues the rXCI phenotype observed in Rnf12

Indexed as

Genomic ImprintingAnimalsEmbryo, MammalianFemaleGene DeletionMaleMiceMice, Inbred C57BLMice, KnockoutModels, BiologicalMouse Embryonic Stem CellsPhenotypeProtein StabilityTranscription FactorsUbiquitin-Protein LigasesX Chromosome InactivationRlim protein, mouseTranscription FactorsUbiquitin-Protein LigasesZfp42 protein, mouse

Identifiers

PMID30420655
PMCPMC6232137
OpenAlexW2899638671

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.