Evidence map›Paper›PMID 30484321›Full record

ArticleNano letters2019

Porous Zero-Mode Waveguides for Picogram-Level DNA Capture.

Vivek Jadhav, David P Hoogerheide, Jonas Korlach, Meni Wanunu

Abstract read
In one paragraph

Article in Nano letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. DNA Manipulation and Single-Molecule Imaging.Molecules (Basel, Switzerland) · 2021
    Review
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Vivek Jadhav
David P HoogerheideCenter for Neutron Research , National Institute of Standards and Technology , Gaithersburg , Maryland 20899 , United States.ORCID 0000-0003-2918-1469
Jonas KorlachPacific Biosciences , Menlo Park , California 94025 , United States.

Funding

Direct picogram DNA and RNA sequencing using nanopore Zero-mode waveguidesR01HG009186 · NHGRI · NORTHEASTERN UNIVERSITY · PI WANUNU, MENI · 2016 to 2019
$2.3M
NHGRI NIH HHS R01 HG009186
6 · The paper itself

Abstract

We have recently shown that nanopore zero-mode waveguides are effective tools for capturing picogram levels of long DNA fragments for single-molecule DNA sequencing. Despite these key advantages, the manufacturing of large arrays is not practical due to the need for serial nanopore fabrication. To overcome this challenge, we have developed an approach for the wafer-scale fabrication of waveguide arrays on low-cost porous membranes, which are deposited using molecular-layer deposition. The membrane at each waveguide base contains a network of serpentine pores that allows for efficient electrophoretic DNA capture at picogram levels while eliminating the need for prohibitive serial pore milling. Here, we show that the loading efficiency of these porous waveguides is up to 2 orders of magnitude greater than their nanopore predecessors. This new device facilitates the scaling-up of the process, greatly reducing the cost and effort of manufacturing. Furthermore, the porous zero-mode waveguides can be used for applications that benefit from low-input single-molecule real-time sequencing.

Indexed as

Asbestos, SerpentineDNAEquipment DesignMembranes, ArtificialNanoporesNanotechnologyPorositySequence Analysis, DNAAsbestos, SerpentineDNAMembranes, ArtificialnanofabricationNanoporeporous membraneSMRT sequencingZMWs

Identifiers

PMID30484321
PMCPMC9701543

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.