Evidence map›Paper›PMID 30521589›Full record

ArticlePloS one2018

Extracellular polymeric substances (EPS) producing and oil degrading bacteria isolated from the northern Gulf of Mexico.

Hernando P Bacosa, Manoj Kamalanathan, Meng-Hsuen Chiu, Shih-Ming Tsai, Luni Sun, Jessica M Labonté, Kathleen A Schwehr, David Hala, Peter H Santschi, Wei-Chun Chin and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 62 citations in OpenAlex.

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  12. Role of Polysaccharides in DiatomPlant physiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Hernando P BacosaDepartment of Marine Biology, Texas A&M University at Galveston, Galveston, Texas, United States of America.ORCID 0000-0003-4138-3987
Manoj KamalanathanDepartment of Marine Biology, Texas A&M University at Galveston, Galveston, Texas, United States of America.
Meng-Hsuen ChiuBioengineering Program, School of Engineering, University of California at Merced, Merced, California, United States of America.
Shih-Ming TsaiBioengineering Program, School of Engineering, University of California at Merced, Merced, California, United States of America.
Luni SunDepartment of Marine Sciences, Texas A&M University at Galveston, Galveston, Texas, United States of America.
Jessica M LabontéDepartment of Marine Biology, Texas A&M University at Galveston, Galveston, Texas, United States of America.
Kathleen A SchwehrDepartment of Marine Sciences, Texas A&M University at Galveston, Galveston, Texas, United States of America.
David HalaDepartment of Marine Biology, Texas A&M University at Galveston, Galveston, Texas, United States of America.
Peter H SantschiDepartment of Marine Sciences, Texas A&M University at Galveston, Galveston, Texas, United States of America.
Wei-Chun ChinBioengineering Program, School of Engineering, University of California at Merced, Merced, California, United States of America.
Antonietta QuiggDepartment of Marine Biology, Texas A&M University at Galveston, Galveston, Texas, United States of America.
Texas A&M University at Galveston · USUniversity of California, Merced · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sinking marine oil snow was found to be a major mechanism in the transport of spilled oil from the surface to the deep sea following the Deepwater Horizon (DwH) oil spill. Marine snow formation is primarily facilitated by extracellular polymeric substances (EPS), which are mainly composed of proteins and carbohydrates secreted by microorganisms. While numerous bacteria have been identified to degrade oil, there is a paucity of knowledge on bacteria that produce EPS in response to oil and Corexit exposure in the northern Gulf of Mexico (nGoM). In this study, we isolated bacteria from surface water of the nGoM that grow on oil or Corexit dispersant. Among the 100 strains isolated, nine were identified to produce remarkable amounts of EPS. 16S rRNA gene analysis revealed that six isolates (strains C1, C5, W10, W11, W14, W20) belong to the genus Alteromonas; the others were related to Thalassospira (C8), Aestuariibacter (C12), and Escherichia (W13a). The isolates preferably degraded alkanes (17-77%), over polycyclic aromatic hydrocarbons (0.90-23%). The EPS production was determined in the presence of a water accommodated fraction (WAF) of oil, a chemical enhanced WAF (CEWAF), Corexit, and control. The highest production of visible aggregates was found in Corexit followed by CEWAF, WAF, and control; indicating that Corexit generally enhanced EPS production. The addition of WAF and Corexit did not affect the carbohydrate content, but significantly increased the protein content of the EPS. On the average, WAF and CEWAF treatments had nine to ten times more proteins, and Corexit had five times higher than the control. Our results reveal that Alteromonas and Thalassospira, among the commonly reported bacteria following the DwH spill, produce protein rich EPS that could have crucial roles in oil degradation and marine snow formation. This study highlights the link between EPS production and bacterial oil-degrading capacity that should not be overlooked during spilled oil clearance.

Indexed as

AlteromonasBacteriaBiodegradation, EnvironmentalCarbohydratesDNA, BacterialDNA, RibosomalExtracellular Polymeric Substance MatrixGeologic SedimentsGulf of AmericaPetroleum PollutionPhylogenyRhodospirillaceaeRNA, Ribosomal, 16SCarbohydratesDNA, BacterialDNA, RibosomalRNA, Ribosomal, 16S

Identifiers

PMID30521589
PMCPMC6283562
OpenAlexW2903752343

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.