Evidence map›Paper›PMID 30539330›Full record

ArticleMolecular neurobiology2019

FOXG1 Regulates PRKAR2B Transcriptionally and Posttranscriptionally via miR200 in the Adult Hippocampus.

Stefan C Weise, Ganeshkumar Arumugam, Alejandro Villarreal, Pavankumar Videm, Stefanie Heidrich, Nils Nebel, Verónica I Dumit, Farahnaz Sananbenesi, Viktoria Reimann, Madeline Craske and 5 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular neurobiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 31 citations in OpenAlex.

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  10. Multimodal epigenetic changes and altered NEUROD1 chromatin binding in the mouse hippocampus underlie FOXG1 syndrome.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  12. FOXG1 Contributes Adult Hippocampal Neurogenesis in Mice.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 3 countries.

Stefan C Weise *Institute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Ganeshkumar Arumugam *Institute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Alejandro Villarreal *Institute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Pavankumar Videm *Bioinformatics Group, Department of Computer Science, Albert-Ludwigs-University Freiburg, 79110, Freiburg, Germany.
Stefanie HeidrichInstitute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Nils NebelInstitute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Verónica I DumitCentre for Biological Systems Analysis (ZBSA), Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Farahnaz SananbenesiGroup for Genome Dynamics in Neurodegenerative Diseases, German Center for Neurodegenerative Diseases (DZNE), 37075, Göttingen, Germany.
Viktoria ReimannGenetics and Experimental Bioinformatics, Faculty of Biology, Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Madeline CraskeActive Motif Incorporation, Carlsbad, CA, USA.
Oliver SchillingCentre for Biological Signalling Studies (BIOSS), Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Wolfgang R HessGenetics and Experimental Bioinformatics, Faculty of Biology, Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany.
Andre FischerGroup for Genome Dynamics in Neurodegenerative Diseases, German Center for Neurodegenerative Diseases (DZNE), 37075, Göttingen, Germany.
Rolf BackofenBioinformatics Group, Department of Computer Science, Albert-Ludwigs-University Freiburg, 79110, Freiburg, Germany.
Tanja VogelInstitute of Anatomy and Cell Biology, Department of Molecular Embryology, Faculty of Medicine, Albert-Ludwigs-University Freiburg, 79104, Freiburg, Germany. tanja.vogel@anat.uni-freiburg.de.ORCID http://orcid.org/0000-0002-0602-9133
University of Freiburg · DEGerman Center for Neurodegenerative Diseases · DEActive Motif (United States) · US

Funding

Bundesministerium für Bildung und Forschung 031A538A de.NBIBundesministerium für Bildung und Forschung 031L0106B de.NBI PartnerDeutsche Forschungsgemeinschaft CRC992Deutsche Forschungsgemeinschaft GRK2344Deutsche Forschungsgemeinschaft SPP1378
6 · The paper itself

Abstract

Rett syndrome is a complex neurodevelopmental disorder that is mainly caused by mutations in MECP2. However, mutations in FOXG1 cause a less frequent form of atypical Rett syndrome, called FOXG1 syndrome. FOXG1 is a key transcription factor crucial for forebrain development, where it maintains the balance between progenitor proliferation and neuronal differentiation. Using genome-wide small RNA sequencing and quantitative proteomics, we identified that FOXG1 affects the biogenesis of miR200b/a/429 and interacts with the ATP-dependent RNA helicase, DDX5/p68. Both FOXG1 and DDX5 associate with the microprocessor complex, whereby DDX5 recruits FOXG1 to DROSHA. RNA-Seq analyses of Foxg1

Indexed as

Age FactorsAnimalsCyclic AMP-Dependent Protein Kinase RIIbeta SubunitForkhead Transcription FactorsHippocampusMiceMice, Inbred C57BLMice, TransgenicMicroRNAsNerve Tissue ProteinsTranscription, GeneticCyclic AMP-Dependent Protein Kinase RIIbeta SubunitForkhead Transcription FactorsFoxg1 protein, mouseMicroRNAsMirn200 microRNA, mouseNerve Tissue ProteinsPRKAR2B protein, humanAtypical Rett syndromeDROSHAMECP2NeurogenesisPKA

Identifiers

PMID30539330
PMCPMC6647430
OpenAlexW2904138239

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.