Evidence map›Paper›PMID 30558682›Full record

ArticleMicrobiome2018

Hunters or farmers? Microbiome characteristics help elucidate the diet composition in an aquatic carnivorous plant.

Dagmara Sirová, Jiří Bárta, Karel Šimek, Thomas Posch, Jiří Pech, James Stone, Jakub Borovec, Lubomír Adamec, Jaroslav Vrba

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Microbiome, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 27 citations in OpenAlex.

  1. Carnivorous Plants as Model Species for Recent and Further Studies.Results and problems in cell differentiation · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. A Historical Perspective of Bladderworts (Plants (Basel, Switzerland) · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. The Terrestrial Carnivorous PlantInternational journal of molecular sciences · 2019
    Article
  11. Article
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 4 countries.

Dagmara SirováBiology Centre CAS, Institute of Hydrobiology, Na Sádkách 7, CZ-37005, České Budějovice, Czech Republic. dagmara_sirova@hotmail.com.ORCID 0000-0003-1662-3045
Jiří BártaFaculty of Science, University of South Bohemia, Branišovská 1760, CZ-37005, České Budějovice, Czech Republic.
Karel ŠimekBiology Centre CAS, Institute of Hydrobiology, Na Sádkách 7, CZ-37005, České Budějovice, Czech Republic.
Thomas PoschLimnological Station, Department of Plant and Microbial Biology, University of Zurich, CH-8802, Kilchberg, Switzerland.
Jiří PechFaculty of Science, University of South Bohemia, Branišovská 1760, CZ-37005, České Budějovice, Czech Republic.
James StoneDepartment of Biology and Wildlife, University of Alaska Fairbanks, Fairbanks, AK-99775, USA.
Jakub BorovecBiology Centre CAS, Institute of Hydrobiology, Na Sádkách 7, CZ-37005, České Budějovice, Czech Republic.
Lubomír AdamecInstitute of Botany CAS, Dukelská 135, CZ-37982, Třeboň, Czech Republic.
Jaroslav VrbaBiology Centre CAS, Institute of Hydrobiology, Na Sádkách 7, CZ-37005, České Budějovice, Czech Republic.
University of South Bohemia in České Budějovice · CZCzech Academy of Sciences, Institute of Botany · CZInstitute of Hydrobiology, Biology Centre, Academy of Sciences of the Czech Republic · CZSewanee: The University of the South · USUniversity of Alaska Fairbanks · USUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundUtricularia are rootless aquatic carnivorous plants which have recently attracted the attention of researchers due to the peculiarities of their miniaturized genomes. Here, we focus on a novel aspect of Utricularia ecophysiology-the interactions with and within the complex communities of microorganisms colonizing their traps and external surfaces.

resultsBacteria, fungi, algae, and protozoa inhabit the miniature ecosystem of the Utricularia trap lumen and are involved in the regeneration of nutrients from complex organic matter. By combining molecular methods, microscopy, and other approaches to assess the trap-associated microbial community structure, diversity, function, as well as the nutrient turn-over potential of bacterivory, we gained insight into the nutrient acquisition strategies of the Utricularia hosts.

conclusionsWe conclude that Utricularia traps can, in terms of their ecophysiological function, be compared to microbial cultivators or farms, which center around complex microbial consortia acting synergistically to convert complex organic matter, often of algal origin, into a source of utilizable nutrients for the plants.

Indexed as

Aquatic OrganismsBacteriaDNA, AlgalDNA, BacterialDNA, FungalFungiGene Expression ProfilingLamialesMetagenomicsMicrobial ConsortiaPhylogenyDNA, AlgalDNA, BacterialDNA, FungalAlgaeBacteriaCiliate bacterivoryDigestive mutualismFungiHerbivoryNutrient turnoverPlant–microbe interactionsProtistsUtricularia traps

Identifiers

PMID30558682
PMCPMC6297986
OpenAlexW2904122756

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.