Evidence map›Paper›PMID 30608700›Full record

ArticleJournal of proteome research2019

Quantitative Proteomic Analysis of Small and Large Extracellular Vesicles (EVs) Reveals Enrichment of Adhesion Proteins in Small EVs.

Lizandra Jimenez, Hui Yu, Andrew J McKenzie, Jeffrey L Franklin, James G Patton, Qi Liu, Alissa M Weaver

Abstract read
In one paragraph

Article in Journal of proteome research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 110 citations in OpenAlex.

  1. Article
  2. Review
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  8. Review
  9. Review
  10. Article
  11. Biogenesis and functional implications of extracellular vesicles in cancer metastasis.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  12. Exosomes are specialized vehicles to induce fibronectin assembly.bioRxiv : the preprint server for biology · 2025
    Article
  13. Review
  14. Review
  15. Article
  16. Human Brain Endothelial Cell-Derived Extracellular Vesicles ReduceInternational journal of molecular sciences · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Lizandra JimenezDepartment of Cell and Developmental Biology , Vanderbilt University School of Medicine , Nashville , Tennessee 37232 , United States.ORCID 0000-0002-5024-4383
Hui YuDepartment of Internal Medicine , University of New Mexico , Albuquerque , New Mexico 87131 , United States.ORCID 0000-0002-4491-8855
Andrew J McKenzieSarah Cannon Research Institute , Nashville , Tennessee 37203 , United States.ORCID 0000-0002-5088-1876
Jeffrey L FranklinDepartment of Cell and Developmental Biology , Vanderbilt University School of Medicine , Nashville , Tennessee 37232 , United States.ORCID 0000-0002-7111-4449
James G PattonDepartment of Biological Sciences , Vanderbilt University School of Medicine , Nashville , Tennessee 37212 , United States.
Qi LiuDepartment of Biostatistics , Vanderbilt University Medical Center , Nashville , Tennessee 37232 , United States.
Alissa M WeaverDepartment of Cell and Developmental Biology , Vanderbilt University School of Medicine , Nashville , Tennessee 37232 , United States.ORCID 0000-0002-4096-8636
Vanderbilt University · USSarah Cannon · USUniversity of New Mexico · USVanderbilt University Medical Center · US

Funding

Vanderbilt Institute for Clinical and Translational Research (VICTR) -Identifying correlates of functional immunity in SARS-CoV-2 convalescent plasmaUL1TR002243 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Paul A. Harris, Wesley H Self · 2017 to 2026
$130.7M
Translational Analysis CoreP30DK058404 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MARY Kay WASHINGTON · 2002 to 2026
$29.9M
Single-Cell Biology and Data Analysis Shared Resource (SCB-DA SR)U54CA217450 · NCI · VANDERBILT UNIVERSITY · PI WEAVER, ALISSA M · 2018 to 2022
$8.5M
Integrated Biological Systems Training in OncologyT32CA119925 · NCI · VANDERBILT UNIVERSITY · PI Vivian Gama, William Patrick Tansey · 2008 to 2026
$7.6M
Trafficking of eRNAs in K-Ras Mutant Colon CancerU19CA179514 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI COFFEY, ROBERT J. · 2013 to 2017
$5.3M
Exosome secretion in breast cancer progressionR01CA206458 · NCI · VANDERBILT UNIVERSITY · PI PONIK, SUZANNE MARIE, WEAVER, ALISSA M · 2016 to 2025
$4.6M
Exosome-Filopodia InteractionsR01GM117916 · NIGMS · VANDERBILT UNIVERSITY · PI WEAVER, ALISSA M · 2016 to 2019
$2.0M
KRAS-regulated Ago2-mediated sorting of extracellular RNAs into exosomesF32CA217064 · NCI · VANDERBILT UNIVERSITY · PI JIMENEZ, LIZANDRA · 2017 to 2019
$130k
NCATS NIH HHS UL1 TR002243NCI NIH HHS F32 CA217064NCI NIH HHS R01 CA206458NCI NIH HHS T32 CA119925NCI NIH HHS U19 CA179514NCI NIH HHS U54 CA217450NIDDK NIH HHS P30 DK058404NIGMS NIH HHS R01 GM117916
6 · The paper itself

Abstract

Extracellular vesicles (EVs) are important mediators of cell-cell communication due to their cargo content of proteins, lipids, and RNAs. We previously reported that small EVs (SEVs) called exosomes promote directed and random cell motility, invasion, and serum-independent growth. In contrast, larger EVs (LEVs) were not active in those assays, but might have unique functional properties. In order to identify protein cargos that may contribute to different functions of SEVs and LEVs, we used isobaric tags for relative and absolute quantitation (iTRAQ)-liquid chromatography (LC) tandem mass spectrometry (MS) on EVs isolated from a colon cancer cell line. Bioinformatics analyses revealed that SEVs are enriched in proteins associated with cell-cell junctions, cell-matrix adhesion, exosome biogenesis machinery, and various signaling pathways. In contrast, LEVs are enriched in proteins associated with ribosome and RNA biogenesis, processing, and metabolism. Western blot analysis of EVs purified from two different cancer cell types confirmed the enrichment of cell-matrix and cell-cell adhesion proteins in SEVs. Consistent with those data, we found that cells exhibit enhanced adhesion to surfaces coated with SEVs compared to an equal protein concentration of LEVs. These data suggest that a major function of SEVs is to promote cellular adhesion.

Indexed as

Cell AdhesionCell Adhesion MoleculesCell Line, TumorChromatography, LiquidExosomesExtracellular VesiclesHumansParticle SizeProteomicsTandem Mass SpectrometryCell Adhesion Moleculesadhesionexosomesextracellular vesiclesiTRAQmicrovesiclesproteomics

Identifiers

PMID30608700
PMCPMC6411421
OpenAlexW2907217227

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.