Evidence map›Paper›PMID 30632017›Full record

ArticleVirus genes2019

Nasal virome of dogs with respiratory infection signs include novel taupapillomaviruses.

Eda Altan, M Alexis Seguin, Christian M Leutenegger, Tung Gia Phan, Xutao Deng, Eric Delwart

Open access · bronzeAbstract read
In one paragraph

Article in Virus genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Canine and feline papillomaviruses: an update.Frontiers in veterinary science · 2023
    Review
  9. Review
  10. Coinfection with canine distemper virus and canine circovirus in a dog in Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Eda AltanVitalant Research Institute, 270 Masonic Ave, San Francisco, CA, USA.
M Alexis SeguinIDEXX Laboratories, Inc., Westbrook, ME, 04092, USA.
Christian M LeuteneggerIDEXX Laboratories, Inc., West Sacramento, CA, 95605, USA.
Tung Gia PhanVitalant Research Institute, 270 Masonic Ave, San Francisco, CA, USA.
Xutao DengVitalant Research Institute, 270 Masonic Ave, San Francisco, CA, USA.
Eric DelwartVitalant Research Institute, 270 Masonic Ave, San Francisco, CA, USA. Eric.Delwart@ucsf.edu.
Pacific Research Institute · USIDEXX Laboratories (United States) · USUniversity of California, San Francisco · US

Funding

Blood Systems Research Institute 5149.14
6 · The paper itself

Abstract

Using viral metagenomics, we characterized the mammalian virome of nasal swabs from 57 dogs with unexplained signs of respiratory infection showing mostly negative results using the IDEXX Canine Respiratory Disease RealPCR™ Panel. We identified canine parainfluenza virus 5, canine respiratory coronavirus, carnivore bocaparvovirus 3, canine circovirus and canine papillomavirus 9. Novel canine taupapillomaviruses (CPV21-23) were also identified in 3 dogs and their complete genome sequenced showing L1 nucleotide identity ranging from 68.4 to 70.3% to their closest taupapillomavirus relative. Taupapillomavirus were the only mammalian viral nucleic acids detected in two affected dogs, while a third dog was coinfected with low levels of canine parainfluenza 5. A role for these taupapillomavirues in canine respiratory disease remains to be determined.

Indexed as

MetagenomicsAnimalsCoinfectionCoronavirus, CanineDog DiseasesDogsParamyxoviridae InfectionsRespiratory Tract InfectionsCanineNext generation sequencingPapillomaviridaePapillomavirusRespiratory infectionTaupapillomavirus

Identifiers

PMID30632017
PMCPMC7088604
OpenAlexW2909501579

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.