Evidence map›Paper›PMID 30697918›Full record

ArticleJournal of cellular and molecular medicine2019

Absence of PARP-1 affects Cxcl12 expression by increasing DNA demethylation.

Anja Tolić, Nevena Grdović, Svetlana Dinić, Jovana Rajić, Miloš Đorđević, Marija Sinadinović, Jelena Arambašić Jovanović, Mirjana Mihailović, Goran Poznanović, Aleksandra Uskoković and 1 more

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Leveraging PARP-1/2 to Target Distant Metastasis.International journal of molecular sciences · 2024
    Review
  3. Article
  4. Review
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Anja TolićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Nevena GrdovićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Svetlana DinićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Jovana RajićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Miloš ĐorđevićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Marija SinadinovićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Jelena Arambašić JovanovićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Mirjana MihailovićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Goran PoznanovićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
Aleksandra UskokovićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.ORCID 0000-0002-9616-1102
Melita VidakovićDepartment of Molecular Biology, Institute for Biological Research, University of Belgrade, Belgrade, Serbia.
University of Belgrade · RS

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Poly [ADP-ribose] polymerase 1 (PARP-1) has an inhibitory effect on C-X-C motif chemokine 12 gene (Cxcl12) transcription. We examined whether PARP-1 affects the epigenetic control of Cxcl12 expression by changing its DNA methylation pattern. We observed increased expression of Cxcl12 in PARP-1 knock-out mouse embryonic fibroblasts (PARP1-/-) in comparison to wild-type mouse embryonic fibroblasts (NIH3T3). In the Cxcl12 gene, a CpG island is present in the promoter, the 5' untranslated region (5' UTR), the first exon and in the first intron. The methylation state of Cxcl12 in each cell line was investigated by methylation-specific PCR (MSP) and high resolution melting analysis (HRM). Both methods revealed strong demethylation in PARP1-/- compared to NIH3T3 cells in all four DNA regions. Increased expression of the Ten-eleven translocation (Tet) genes in PARP1-/- cells indicated that TETs could be important factors in Cxcl12 demethylation in the absence of PARP-1, accounting for its increased expression. Our results showed that PARP-1 was a potential upstream player in (de)methylation events that modulated Cxcl12 expression.

Indexed as

Epigenesis, Genetic5' Untranslated RegionsAnimalsChemokine CXCL12CpG IslandsDNADNA-Binding ProteinsDNA MethylationExonsIntronsMiceMice, KnockoutNIH 3T3 CellsPoly (ADP-Ribose) Polymerase-1Promoter Regions, GeneticProto-Oncogene Proteins5' Untranslated RegionsChemokine CXCL12Cxcl12 protein, mouseDNADNA-Binding ProteinsParp1 protein, mousePoly (ADP-Ribose) Polymerase-1Proto-Oncogene ProteinsTET1 protein, mouseCXCL12DNA demethylationPARP-1TETs

Identifiers

PMID30697918
PMCPMC6433732
OpenAlexW2914927873

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.