Evidence map›Paper›PMID 30765794›Full record

ArticleScientific reports2019

Five genomic regions have a major impact on fat composition in Iberian pigs.

R N Pena, J L Noguera, M J García-Santana, E González, J F Tejeda, R Ros-Freixedes, N Ibáñez-Escriche

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Fat Deposition and Fat Effects on Meat Quality-A Review.Animals : an open access journal from MDPI · 2022
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

R N PenaDepartament de Ciència Animal, Universitat de Lleida-Agrotecnio Center, 25198, Lleida, Spain.ORCID 0000-0002-3558-7302
J L NogueraIRTA, Genètica i Millora Animal, 25198, Lleida, Spain.
M J García-SantanaINGA FOOD S.A, 06200, Almendralejo, Spain.
E GonzálezTecnología de los alimentos, Universidad de Extremadura, 06006, Badajoz, Spain.
J F TejedaTecnología de los alimentos, Universidad de Extremadura, 06006, Badajoz, Spain.
R Ros-FreixedesDepartament de Ciència Animal, Universitat de Lleida-Agrotecnio Center, 25198, Lleida, Spain.ORCID 0000-0002-3745-6736
N Ibáñez-EscricheInstitute for Animal Science and Technology, Universitat Politècnica de València, 46022, Valencia, Spain. noeibes@dca.upv.es.
Universidad de Extremadura · ESUniversitat de Lleida · ESRoslin Institute · GBUniversitat Politècnica de València · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The adipogenic nature of the Iberian pig defines many quality attributes of its fresh meat and dry-cured products. The distinct varieties of Iberian pig exhibit great variability in the genetic parameters for fat deposition and composition in muscle. The aim of this work is to identify common and distinct genomic regions related to fatty acid composition in Retinto, Torbiscal, and Entrepelado Iberian varieties and their reciprocal crosses through a diallelic experiment. In this study, we performed GWAS using a high density SNP array on 382 pigs with the multimarker regression Bayes B method implemented in GenSel. A number of genomic regions showed strong associations with the percentage of saturated and unsaturated fatty acid in intramuscular fat. In particular, five regions with Bayes Factor >100 (SSC2 and SSC7) or >50 (SSC2 and SSC12) explained an important fraction of the genetic variance for miristic, palmitoleic, monounsaturated (>14%), oleic (>10%) and polyunsaturated (>5%) fatty acids. Six genes (RXRB, PSMB8, CHGA, ACACA, PLIN4, PLIN5) located in these regions have been investigated in relation to intramuscular composition variability in Iberian pigs, with two SNPs at the RXRB gene giving the most consistent results on oleic and monounsaturated fatty acid content.

Indexed as

AdipogenesisAdiposityAnimalsFatty AcidsFatty Acids, MonounsaturatedFatty Acids, UnsaturatedGenomeGenomicsMeatObesityPhenotypeSwineFatty AcidsFatty Acids, MonounsaturatedFatty Acids, Unsaturated

Identifiers

PMID30765794
PMCPMC6375979
OpenAlexW2912252103

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.