Evidence map›Paper›PMID 30833470›Full record

ArticleDiabetes2019

HLA Class II Antigen Processing and Presentation Pathway Components Demonstrated by Transcriptome and Protein Analyses of Islet β-Cells From Donors With Type 1 Diabetes.

Mark A Russell, Sambra D Redick, David M Blodgett, Sarah J Richardson, Pia Leete, Lars Krogvold, Knut Dahl-Jørgensen, Rita Bottino, Marcela Brissova, Jason M Spaeth and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in Diabetes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed, 1 pooled it
17.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 1 synthesis or guideline pooled it, 140 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Islet Tissue Macrophages in Immunity Homeostasis and Type 1 Diabetes.Clinical reviews in allergy & immunology · 2025
    Review
  13. A Cure for Type 1 Diabetes: Are We There Yet?Diabetes technology & therapeutics · 2025
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 3 countries.

Mark A RussellInstitute of Biomedical and Clinical Science, University of Exeter Medical School, Exeter, Devon, U.K.
Sambra D RedickProgram in Molecular Medicine, Diabetes Center of Excellence, University of Massachusetts Medical School, Worcester, MA.
David M BlodgettDivision of Diabetes, Department of Medicine, Diabetes Center of Excellence, University of Massachusetts Medical School, Worcester, MA.
Sarah J RichardsonInstitute of Biomedical and Clinical Science, University of Exeter Medical School, Exeter, Devon, U.K.ORCID 0000-0002-1160-6062
Pia LeeteInstitute of Biomedical and Clinical Science, University of Exeter Medical School, Exeter, Devon, U.K.
Lars KrogvoldPediatric Department, Oslo University Hospital, and Faculty of Medicine, University of Oslo, Oslo, Norway.
Knut Dahl-JørgensenPediatric Department, Oslo University Hospital, and Faculty of Medicine, University of Oslo, Oslo, Norway.
Rita BottinoInstitute of Cellular Therapeutics, Allegheny-Singer Research Institute Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, PA.
Marcela BrissovaDivision of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN.
Jason M SpaethDepartment of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN.
Jenny Aurielle B BabonDivision of Diabetes, Department of Medicine, Diabetes Center of Excellence, University of Massachusetts Medical School, Worcester, MA.
Rachana HaliyurDepartment of Molecular Physiology and Biophysics, Vanderbilt University, Nashville, TN.
Alvin C PowersDivision of Diabetes, Endocrinology and Metabolism, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN.ORCID 0000-0003-1941-5786
Chaoxing YangProgram in Molecular Medicine, Diabetes Center of Excellence, University of Massachusetts Medical School, Worcester, MA.
Sally C KentDivision of Diabetes, Department of Medicine, Diabetes Center of Excellence, University of Massachusetts Medical School, Worcester, MA.
Alan G DerrProgram in Bioinformatics, University of Massachusetts Medical School, Worcester, MA.
Alper KucukuralProgram in Bioinformatics, University of Massachusetts Medical School, Worcester, MA.
Manuel G GarberProgram in Bioinformatics, University of Massachusetts Medical School, Worcester, MA.
Noel G MorganInstitute of Biomedical and Clinical Science, University of Exeter Medical School, Exeter, Devon, U.K.ORCID 0000-0003-1537-8113
David M HarlanDivision of Diabetes, Department of Medicine, Diabetes Center of Excellence, University of Massachusetts Medical School, Worcester, MA david.harlan@umassmemorial.org.ORCID 0000-0002-6938-8109
University of Massachusetts Chan Medical School · USUniversity of Exeter · GBVanderbilt University · USOslo University Hospital · NOAllegheny-Singer Research Institute · USVanderbilt University Medical Center · US

Funding

Vanderbilt Diabetes Research CenterP30DK020593 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI OWEN P MCGUINNESS · 2012 to 2026
$29.3M
TRANSGENIC MOUSE/ ES CELL SHARES RESOURCESP60DK020593 · NIDDK · VANDERBILT UNIVERSITY · PI ELASY, TOM A · 1986 to 2011
$28.1M
Supplement to Integrated Program for Human Pancreas Procurement and AnalysisUC4DK112232 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI ATKINSON, MARK A., POWERS, ALVIN C · 2016 to 2020
$8.4M
Discovery of Pancreatic Signatures in Type 2 Diabetes MellitusR24DK106755 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI CAI, LONG, CAPRIOLI, RICHARD M · 2015 to 2019
$6.2M
High-resolution analysis of juvenile human pancreas maturationUC4DK108120 · NIDDK · VANDERBILT UNIVERSITY · PI CAI, LONG, GRADINARU, VIVIANA · 2015 to 2015
$4.4M
Molecular Mechanisms of Physiologic Beta Cell Growth in Juvenile Human PancreasUC4DK104211 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI KIM, SEUNG K, POWERS, ALVIN C · 2014 to 2015
$4.0M
Human Islet-Infiltrating T Cell Biology: Reactivity, Structure, and FunctionUC4DK116284 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI HARLAN, DAVID MARSHALL, KENT, SALLY CHOATE · 2017 to 2017
$2.0M
Stage-specific Beta Cell Response and Biomarker Profile During Virus-induced T1DR01DK105837 · NIDDK · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GREINER, DALE LESLIE, HARLAN, DAVID MARSHALL · 2016 to 2019
$1.5M
NIDDK NIH HHS P30 DK020593NIDDK NIH HHS P60 DK020593NIDDK NIH HHS R01 DK105837NIDDK NIH HHS R24 DK106755NIDDK NIH HHS UC4 DK104211NIDDK NIH HHS UC4 DK108120NIDDK NIH HHS UC4 DK112232NIDDK NIH HHS UC4 DK116284
6 · The paper itself

Abstract

Type 1 diabetes studies consistently generate data showing islet β-cell dysfunction and T cell-mediated anti-β-cell-specific autoimmunity. To explore the pathogenesis, we interrogated the β-cell transcriptomes from donors with and without type 1 diabetes using both bulk-sorted and single β-cells. Consistent with immunohistological studies, β-cells from donors with type 1 diabetes displayed increased Class I transcripts and associated mRNA species. These β-cells also expressed mRNA for Class II and Class II antigen presentation pathway components, but lacked the macrophage marker CD68. Immunohistological study of three independent cohorts of donors with recent-onset type 1 diabetes showed Class II protein and its transcriptional regulator Class II MHC

Indexed as

Antigen PresentationAutoimmunityCD4-Positive T-LymphocytesCells, CulturedDiabetes Mellitus, Type 1Histocompatibility Antigens Class IIHumansInsulinInsulin-Secreting CellsHistocompatibility Antigens Class IIInsulin

Identifiers

PMID30833470
PMCPMC6477908
OpenAlexW2920668352

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.