Evidence map›Paper›PMID 30849413›Full record

ArticleVirus research2019

PEDV nsp16 negatively regulates innate immunity to promote viral proliferation.

Peidian Shi, Yanxin Su, Ruiqiao Li, Zhixuan Liang, Shuren Dong, Jinhai Huang

Abstract read
In one paragraph

Article in Virus research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Frontiers in genetics · 2025
    Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Expression and immunogenicity of non-structural protein 8 of porcine epidemic diarrhea virus.Veterinary research forum : an international quarterly journal · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Paneth cells in farm animals: current status and future direction.Journal of animal science and biotechnology · 2023
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Peidian ShiSchool of Life Sciences, Tianjin University, Tianjin, 300072, China.
Yanxin SuSchool of Life Sciences, Tianjin University, Tianjin, 300072, China.
Ruiqiao LiSchool of Life Sciences, Tianjin University, Tianjin, 300072, China.
Zhixuan LiangTianjin Center of Animal Disease Preventive and Control, Tianjin, China.
Shuren DongNinghe breeding pig farm of Tianjin, China.
Jinhai HuangSchool of Life Sciences, Tianjin University, Tianjin, 300072, China. Electronic address: jinhaih@tju.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type-I IFNs (IFN-I) provide a key mediator of innate antiviral response during virus proliferation. Porcine epidemic diarrhea virus (PEDV), which causes diarrhea in swine of all ages, is a worldwide-distributed alphacoronavirus with economic importance. Here, we screened PEDV RNA modification enzymes involved in regulating antiviral response. Whereas the PEDV nsp13 barely regulates type I IFN, inflammatory cytokines (IL-6, TNF-a) and MHCII, nsp16 and nsp14 (to a lesser extent) down-regulate these antiviral effectors. Importantly, we found nsp16 KDKE tetrad appears to play a key role in interferon inhibition by mutating the D129 catalytic residue. Mechanistically, nsp16 down-regulates the activities of RIG-I and MDA5 mediated IFN-β and ISRE. In turn, the mRNA levels of IFIT family members (IFIT1, IFIT2, IFIT3) was inhibited in cells overexpressing nsp16. In addition, nsp10 enhanced the inhibitory effect of nsp16 on IFN-β. Altogether these results indicate PEDV nsp16 negatively regulates innate immunity to promote viral proliferation. Findings from this study provides novel perspective to advance the understanding in the pathogenesis of PEDV.

Indexed as

Host-Pathogen InteractionsImmunity, InnateAnimalsCell LineDEAD Box Protein 58Down-RegulationInterferon-betaInterferon-Induced Helicase, IFIH1Porcine epidemic diarrhea virusSignal TransductionSwineViral Nonstructural ProteinsVirus ReplicationDEAD Box Protein 58Interferon-betaInterferon-Induced Helicase, IFIH1Viral Nonstructural Proteins2'O-MTaseIFITIFN-βnsp16PEDV

Identifiers

PMID30849413
PMCPMC7114654

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.