Evidence map›Paper›PMID 30859738›Full record

ArticleCNS neuroscience & therapeutics2019

Shared genes between Alzheimer's disease and ischemic stroke.

Chang-Juan Wei, Pan Cui, He Li, Wen-Jing Lang, Gui-You Liu, Xiao-Feng Ma

Open access · goldAbstract read
In one paragraph

Article in CNS neuroscience & therapeutics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed, 1 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Local genetic correlation analysis of Alzheimer's disease and stroke implicatesmedRxiv : the preprint server for health sciences · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. UBE2L3 expression in human gastric cancer and its clinical significance.Journal of cancer research and clinical oncology · 2024
    Article
  8. International journal of molecular sciences · 2024
    Article
  9. ACS omega · 2024
    Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Observational
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Chang-Juan WeiDepartment of Neurology, Tianjin Medical University General Hospital, Tianjin, China.
Pan CuiDepartment of Neurology, Tianjin Medical University General Hospital, Tianjin, China.
He LiDepartment of Neurology, Tianjin Medical University General Hospital, Tianjin, China.
Wen-Jing LangDepartment of Neurology, Tianjin Medical University General Hospital, Tianjin, China.
Gui-You LiuSchool of Life Science and Technology, Harbin Institute of Technology, Harbin, China.
Xiao-Feng MaDepartment of Neurology, Tianjin Medical University General Hospital, Tianjin, China.
Ministry of Education · METianjin Medical University General Hospital · CNHarbin Institute of Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsAlthough converging evidence from experimental and epidemiological studies indicates Alzheimer's disease (AD) and ischemic stroke (IS) are related, the genetic basis underlying their links is less well characterized. Traditional SNP-based genome-wide association studies (GWAS) have failed to uncover shared susceptibility variants of AD and IS. Therefore, this study was designed to investigate whether pleiotropic genes existed between AD and IS to account for their phenotypic association, although this was not reported in previous studies.

methodsTaking advantage of large-scale GWAS summary statistics of AD (17,008 AD cases and 37,154 controls) and IS (10,307 IS cases and 19,326 controls), we performed gene-based analysis implemented in VEGAS2 and Fisher's meta-analysis of the set of overlapped genes of nominal significance in both diseases. Subsequently, gene expression analysis in AD- or IS-associated expression datasets was conducted to explore the transcriptional alterations of pleiotropic genes identified.

results16 AD-IS pleiotropic genes surpassed the cutoff for Bonferroni-corrected significance. Notably, MS4A4A and TREM2, two established AD-susceptibility genes showed remarkable alterations in the spleens and brains afflicted by IS, respectively. Among the prioritized genes identified by virtue of literature-based knowledge, most are immune-relevant genes (EPHA1, MS4A4A, UBE2L3 and TREM2), implicating crucial roles of the immune system in the pathogenesis of AD and IS.

conclusionsThe observation that AD and IS had shared disease-associated genes offered mechanistic insights into their common pathogenesis, predominantly involving the immune system. More importantly, our findings have important implications for future research directions, which are encouraged to verify the involvement of these candidates in AD and IS and interpret the exact molecular mechanisms of action.

Indexed as

Genetic Predisposition to DiseaseAlzheimer DiseaseBrain IschemiaGenome-Wide Association StudyHumansMembrane GlycoproteinsMembrane ProteinsPolymorphism, Single NucleotideReceptor, EphA1Receptors, ImmunologicStrokeUbiquitin-Conjugating EnzymesZyxinMembrane GlycoproteinsMembrane ProteinsMS4A4A protein, humanReceptor, EphA1Receptors, ImmunologicTREM2 protein, humanUBE2L3 protein, humanUbiquitin-Conjugating EnzymesZyxinZYX protein, humanAlzheimer’s diseasegene-based analysisgene expression analysisgenome-wide association studiesischemic strokepleiotropic genesVersatile Gene-based Association Study-2 version 2

Identifiers

PMID30859738
PMCPMC6630005
OpenAlexW2921820524

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.