Evidence map›Paper›PMID 30920136›Full record

ArticleAmerican journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons2019

The impact of donor and recipient common clinical and genetic variation on estimated glomerular filtration rate in a European renal transplant population.

Caragh P Stapleton, Andreas Heinzel, Weihua Guan, Peter J van der Most, Jessica van Setten, Graham M Lord, Brendan J Keating, Ajay K Israni, Martin H de Borst, Stephan J L Bakker and 28 more

Abstract read
In one paragraph

Article in American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Guideline
  2. Article
  3. Donor and Recipient Polygenic Risk Scores Influence Kidney Transplant Function.Transplant international : official journal of the European Society for Organ Transplantation · 2025
    Article
  4. Article
  5. Monogenic Kidney Diseases in Kidney Transplantation.Kidney international reports · 2024
    Review
  6. Novel Aspects of Immunogenetics and Post-Transplant Events in Kidney Transplantation.Transplant international : official journal of the European Society for Organ Transplantation · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. The Clinical Impact of the CFrontiers in pharmacology · 2020
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

38 authors.

Caragh P StapletonDepartment of Molecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.
Andreas HeinzelDivision of Nephrology and Dialysis, Department of Internal Medicine III, Medical University of Vienna, Vienna, Austria.
Weihua GuanDepartment of Biostatistics, University of Minnesota, Minneapolis, Minnesota.
Peter J van der MostDepartments of Epidemiology, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands.
Jessica van SettenDepartment of Cardiology, University Medical Center Utrecht, University of Utrecht, Utrecht, The Netherlands.
Graham M LordKing's College London, MRC Centre for Transplantation, London, UK.
Brendan J KeatingDepartment of Surgery, Penn Transplant Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania.
Ajay K IsraniDepartment of Medicine, Hennepin County Medical Center, University of Minnesota, Minneapolis, Minnesota.
Martin H de BorstDivision of Nephrology, Department of Internal Medicine, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands.
Stephan J L BakkerDivision of Nephrology, Department of Internal Medicine, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands.
Harold SniederDepartments of Epidemiology, University Medical Center Groningen, University of Groningen, Groningen, The Netherlands.
Michael E WealeDivision of Genetics & Molecular Medicine, King's College London, London, UK.
Florence DelaneyKing's College London, MRC Centre for Transplantation, London, UK.
Maria P Hernandez-FuentesKing's College London, MRC Centre for Transplantation, London, UK.
Roman Reindl-SchwaighoferDivision of Nephrology and Dialysis, Department of Internal Medicine III, Medical University of Vienna, Vienna, Austria.ORCID 0000-0002-4419-6282
Rainer OberbauerDivision of Nephrology and Dialysis, Department of Internal Medicine III, Medical University of Vienna, Vienna, Austria.
Pamala A JacobsonDepartment of Experimental and Clinical Pharmacology, College of Pharmacy, University of Minnesota, Minneapolis, Minnesota.
Patrick B MarkInstitute of Cardiovascular and Medical Sciences, BHF Cardiovascular Research Centre, University of Glasgow, Glasgow, UK.
Fiona A ChapmanInstitute of Cardiovascular and Medical Sciences, BHF Cardiovascular Research Centre, University of Glasgow, Glasgow, UK.
Paul J PhelanDepartment of Nephrology, Royal Infirmary of Edinburgh, NHS Lothian, Edinburgh, UK.
Claire KennedyDepartment of Nephrology, Beaumont Hospital, Dublin, Ireland.
Donal SextonDepartment of Nephrology, Beaumont Hospital, Dublin, Ireland.ORCID 0000-0001-8262-632X
Susan MurrayDepartment of Nephrology, Beaumont Hospital, Dublin, Ireland.
Alan JardineInstitute of Cardiovascular and Medical Sciences, BHF Cardiovascular Research Centre, University of Glasgow, Glasgow, UK.
Jamie P TraynorInstitute of Cardiovascular and Medical Sciences, BHF Cardiovascular Research Centre, University of Glasgow, Glasgow, UK.
Amy Jayne McKnightCentre for Public Health, Queen's University of Belfast, Belfast, UK.
Alexander P MaxwellCentre for Public Health, Queen's University of Belfast, Belfast, UK.
Laura J SmythCentre for Public Health, Queen's University of Belfast, Belfast, UK.
William S OettingDepartment of Experimental and Clinical Pharmacology, College of Pharmacy, University of Minnesota, Minneapolis, Minnesota.
Arthur J MatasDepartment of Surgery, University of Minnesota, Minneapolis, Minnesota.
Roslyn B MannonDepartment of Medicine, University of Alabama at Birmingham, Birmingham, Alabama.
David P SchladtHennepin Healthcare Research Institute, Minneapolis, Minnesota.
David N IkléRho, Chapel Hill, North Carolina.
Gianpiero L CavalleriDepartment of Molecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, Dublin, Ireland.ORCID 0000-0002-9802-0506
Peter J ConlonDepartment of Nephrology, Royal Infirmary of Edinburgh, NHS Lothian, Edinburgh, UK.
UK Ireland Renal Transplant Consortium
DeKAF Genomics and GEN03 Studies
International Genetics and Translational Research in Transplantation Network

Funding

Transplantation GroupUM2AI117870 · NIAID · RHO FEDERAL SYSTEMS DIVISION, INC. · PI DAVID, GLORIA · 2015 to 2023
$208.1M
Pharmacogenomics of Immune Suppressants in Kidney TransplantationU19AI070119 · NIAID · UNIVERSITY OF MINNESOTA · PI MATAS, ARTHUR J · 2006 to 2016
$17.1M
Long-term Deterioration of Kidney Allograft FunctionU01AI058013 · NIAID · UNIVERSITY OF MINNESOTA TWIN CITIES · PI MATAS, ARTHUR J · 2005 to 2010
$10.2M
Medical Research Council G0600698Medical Research Council G0802068Medical Research Council MC_PC_15025Medical Research Council MC_PC_16018Medical Research Council MR/J006742/1Medical Research Council MR/K002996/1Medical Research Council MR/K500999/1NIAID NIH HHS U01 AI058013NIAID NIH HHS U19 AI070119NIAID NIH HHS UM2 AI117870
6 · The paper itself

Abstract

Genetic variation across the human leukocyte antigen loci is known to influence renal-transplant outcome. However, the impact of genetic variation beyond the human leukocyte antigen loci is less clear. We tested the association of common genetic variation and clinical characteristics, from both the donor and recipient, with posttransplant eGFR at different time-points, out to 5 years posttransplantation. We conducted GWAS meta-analyses across 10 844 donors and recipients from five European ancestry cohorts. We also analyzed the impact of polygenic risk scores (PRS), calculated using genetic variants associated with nontransplant eGFR, on posttransplant eGFR. PRS calculated using the recipient genotype alone, as well as combined donor and recipient genotypes were significantly associated with eGFR at 1-year posttransplant. Thirty-two percent of the variability in eGFR at 1-year posttransplant was explained by our model containing clinical covariates (including weights for death/graft-failure), principal components and combined donor-recipient PRS, with 0.3% contributed by the PRS. No individual genetic variant was significantly associated with eGFR posttransplant in the GWAS. This is the first study to examine PRS, composed of variants that impact kidney function in the general population, in a posttransplant context. Despite PRS being a significant predictor of eGFR posttransplant, the effect size of common genetic factors is limited compared to clinical variables.

Indexed as

Genetic MarkersGenetic VariationAdultEuropeFemaleFollow-Up StudiesGenome-Wide Association StudyGlomerular Filtration RateGraft RejectionGraft SurvivalHumansKidneyKidney Failure, ChronicKidney Function TestsKidney TransplantationLiving DonorsGenetic Markersbasic (laboratory) research/scienceclinical research/practicegeneticsgenomicsglomerular filtration rate (GFR)kidney transplantation/nephrologymicroarray/gene arraymolecular biology: DNA

Identifiers

PMID30920136
PMCPMC6989089

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.