Evidence map›Paper›PMID 31000790›Full record

ReviewNature reviews. Rheumatology2019

Insights into rheumatic diseases from next-generation sequencing.

Laura T Donlin, Sung-Ho Park, Eugenia Giannopoulou, Aleksandra Ivovic, Kyung-Hyun Park-Min, Richard M Siegel, Lionel B Ivashkiv

Abstract readReview
In one paragraph

Review in Nature reviews. Rheumatology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Synovial MS4A4A correlates with inflammation and counteracts response to corticosteroids in arthritis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  17. Review
  18. Peptide-Based Vaccination Therapy for Rheumatic Diseases.Journal of immunology research · 2020
    Review
  19. Synovial Tissue: Cellular and Molecular Phenotyping.Current rheumatology reports · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Laura T DonlinArthritis and Tissue Degeneration Program, Hospital for Special Surgery, New York, NY, USA.ORCID http://orcid.org/0000-0002-1428-090X
Sung-Ho ParkArthritis and Tissue Degeneration Program, Hospital for Special Surgery, New York, NY, USA.
Eugenia GiannopoulouArthritis and Tissue Degeneration Program, Hospital for Special Surgery, New York, NY, USA.
Aleksandra IvovicImmunoregulation Section, Autoimmunity Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA.
Kyung-Hyun Park-MinArthritis and Tissue Degeneration Program, Hospital for Special Surgery, New York, NY, USA.
Richard M SiegelImmunoregulation Section, Autoimmunity Branch, National Institute of Arthritis and Musculoskeletal and Skin Diseases, National Institutes of Health, Bethesda, MD, USA.
Lionel B IvashkivArthritis and Tissue Degeneration Program, Hospital for Special Surgery, New York, NY, USA. ivashkivl@hss.edu.ORCID http://orcid.org/0000-0002-9951-0646
Hospital for Special Surgery · USNational Institutes of Health · US

Funding

STEROID THERAPY AND CYTOKINES IN RHEUMATIC DISEASESR01AI046712 · NIAID · HOSPITAL FOR SPECIAL SURGERY · PI IVASHKIV, LIONEL B · 2000 to 2025
$12.5M
TNF-receptors and programmed cell death in regulation of autoimmunityZIAAR041133 · NIAMS · NATIONAL INSTITUTE OF ARTHRITIS AND MUSCULOSKELETAL AND SKIN DISEASES · PI SIEGEL, RICHARD M · 2009 to 2019
$9.3M
Inhibition of STAT3 and inflammatory cytokine productionR01AI044938 · NIAID · HOSPITAL FOR SPECIAL SURGERY · PI IVASHKIV, LIONEL B · 2000 to 2025
$9.2M
CYTOKINE REGULATION OF RA SYNOVIOCYTE PHENOTYPER01AR046713 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI IVASHKIV, LIONEL B · 1999 to 2025
$8.3M
Fc Receptors &Cytokine Balance in Rheumatoid ArthritisR01AR050401 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI Lionel B Ivashkiv · 2004 to 2026
$7.4M
Negative Regulation of OsteoclastogenesisR01DE019420 · NIDCR · HOSPITAL FOR SPECIAL SURGERY · PI IVASHKIV, LIONEL B · 2008 to 2022
$6.0M
Macrophages in human autoimmune tissue pathologyR01AI148435 · NIAID · HOSPITAL FOR SPECIAL SURGERY · PI Laura T. Donlin · 2020 to 2026
$2.8M
The Crosstalk between MYC and Metabolism during OsteoclastogenesisR01AR069562 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI PARK-MIN, KYUNG-HYUN · 2016 to 2020
$1.9M
A novel regulating pathway in osteoclastogenesis and arthritic bone resorptionR01AR073156 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI PARK-MIN, KYUNG-HYUN · 2018 to 2022
$1.9M
Macrophage and Fibroblast Crosstalk in the RA SynoviumK01AR066063 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI DONLIN, LAURA T. · 2014 to 2018
$527k
NIAID NIH HHS R01 AI044938NIAID NIH HHS R01 AI046712NIAID NIH HHS R01 AI148435NIAMS NIH HHS K01 AR066063NIAMS NIH HHS R01 AR046713NIAMS NIH HHS R01 AR050401NIAMS NIH HHS R01 AR069562NIAMS NIH HHS R01 AR073156NIDCR NIH HHS R01 DE019420
6 · The paper itself

Abstract

Rheumatic diseases have complex aetiologies that are not fully understood, which makes the study of pathogenic mechanisms in these diseases a challenge for researchers. Next-generation sequencing (NGS) and related omics technologies, such as transcriptomics, epigenomics and genomics, provide an unprecedented genome-wide view of gene expression, environmentally responsive epigenetic changes and genetic variation. The integrated application of NGS technologies to samples from carefully phenotyped clinical cohorts of patients has the potential to solve remaining mysteries in the pathogenesis of several rheumatic diseases, to identify new therapeutic targets and to underpin a precision medicine approach to the diagnosis and treatment of rheumatic diseases. This Review provides an overview of the NGS technologies available, showcases important advances in rheumatic disease research already powered by these technologies and highlights NGS approaches that hold particular promise for generating new insights and advancing the field.

Indexed as

High-Throughput Nucleotide SequencingEpigenomicsGene Expression ProfilingGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansRheumatic DiseasesSequence Analysis, DNASequence Analysis, RNA

Identifiers

PMID31000790
PMCPMC6673602
OpenAlexW2939681091

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.