Evidence map›Paper›PMID 31050900›Full record

ArticleThe journal of physical chemistry. B2019

Self-Assembly of Polymer-Encased Lipid Nanodiscs and Membrane Protein Reconstitution.

Bikash R Sahoo, Takuya Genjo, Kanhu C Moharana, Ayyalusamy Ramamoorthy

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Molecular Mechanisms Governing Peptide Nanodisc Assembly and Stability.bioRxiv : the preprint server for biology · 2026
    Article
  3. The journal of physical chemistry. B · 2024
    Review
  4. Sulfonated polystyrenes: pH and MgEuropean polymer journal · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Solid-State NMR Study to Probe the Effects of Divalent Metal Ions (CaLangmuir : the ACS journal of surfaces and colloids · 2021
    Article
  11. Article
  12. Article
  13. Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Bikash R Sahoo
Takuya Genjo
Kanhu C MoharanaDepartment of Bioinformatics , Orissa University of Agriculture and Technology , Bhubaneswar , Odisha 751003 , India.
Ayyalusamy RamamoorthyORCID 0000-0003-1964-1900

Funding

Membrane interaction and disruption by the Alzheimer's amyloid-beta peptideR01AG048934 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAMAMOORTHY, AYYALUSAMY · 2016 to 2020
$2.0M
NIA NIH HHS R01 AG048934
6 · The paper itself

Abstract

The absence of detergent and curvature makes nanodiscs excellent membrane mimetics. The lack of structural and mechanistic model of polymer-encapsulated lipid nanodiscs limits their use in the study of the structure, dynamics, and functions of membrane proteins. In this study, we parameterized and optimized the coarse-graining (CG) bead mapping for two differently charged and functionalized copolymers, containing styrene-maleic acid (SMAEA) and polymethacrylate (PMAQA), for the Martini force-field framework and showed nanodisc formation (<8 nm diameter) on a time scale of tens of microseconds using molecular dynamics (MD) simulations. Structural models of ∼2.0 or 4.8 kDa PMAQA and ∼2.2 kDa SMAEA polymer-based lipid nanodiscs highlight the importance of the polymer chemical structure, size, and polymer-lipid ratio in the optimization of the nanodisc structure. The ideal spatial arrangement of polymers in nanodiscs, nanodisc size, and thermal stability obtained from our MD simulation correlates well with the experimental observations. The polymer-nanodiscs were tested for the reconstitution of single-pass or multipass transmembrane proteins. We expect this study to be useful in the development of novel polymer-based lipid nanodiscs and for the structural studies of membrane proteins.

Indexed as

Amino Acid SequenceAmyloid beta-Protein PrecursorDimyristoylphosphatidylcholineHumansIntegrin beta3Lipid BilayersMaleatesMolecular Dynamics SimulationNanoparticlesNostocPhosphatidylcholinesPolymethacrylic AcidsPolystyrenesRhodopsins, Microbial1,2-dilauroylphosphatidylcholineAmyloid beta-Protein PrecursorDimyristoylphosphatidylcholineIntegrin beta3Lipid BilayersMaleatesPhosphatidylcholinesPolymethacrylic AcidsPolystyrenesRhodopsins, Microbialstyrene-maleic acid polymer

Identifiers

PMID31050900
PMCPMC10317064

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.