Evidence map›Paper›PMID 31101492›Full record

ArticleBioorganic & medicinal chemistry2019

Enhancing the ligand efficiency of anti-HIV compounds targeting frameshift-stimulating RNA.

Viktoriya S Anokhina, John D McAnany, Jessica H Ciesla, Thomas A Hilimire, Netty Santoso, Hongyu Miao, Benjamin L Miller

Open access · greenAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Review
  3. Small Molecules Targeting Viral RNA.International journal of molecular sciences · 2023
    Review
  4. Article
  5. Article
  6. Small molecule-RNA targeting: starting with the fundamentals.Chemical communications (Cambridge, England) · 2020
    Article
  7. Article
  8. Article
  9. Review
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Viktoriya S AnokhinaDepartment of Biochemistry and Biophysics, University of Rochester, Rochester, NY 14642, United States.
John D McAnanyDepartment of Chemistry, University of Rochester, Rochester, NY 14642, United States.
Jessica H CieslaDepartment of Biochemistry and Biophysics, University of Rochester, Rochester, NY 14642, United States.
Thomas A HilimireDepartment of Biochemistry and Biophysics, University of Rochester, Rochester, NY 14642, United States.
Netty SantosoDepartment of Biostatistics, University of Rochester, Rochester, NY 14642, United States.
Hongyu MiaoDepartment of Biostatistics and Data Science, School of Public Health, University of Texas Health Science Center at Houston, Houston, TX 77030, United States.
Benjamin L MillerDepartment of Biochemistry and Biophysics, University of Rochester, Rochester, NY 14642, United States; Department of Dermatology, University of Rochester, Rochester, NY 14642, United States. Electronic address: Benjamin_Miller@urmc.rochester.edu.
University of Rochester · USThe University of Texas Health Science Center at Houston · US

Funding

Training in HIV Replication and PathogenesisT32AI049815 · NIAID · UNIVERSITY OF ROCHESTER · PI WEDEKIND, JOSEPH E · 2001 to 2020
$3.5M
RNA Targeted Small Molecules: Connecting Binding Kinetics to Sequence SelectivityR01GM100788 · NIGMS · UNIVERSITY OF ROCHESTER · PI MILLER, BENJAMIN L · 2012 to 2015
$1.5M
NIAID NIH HHS T32 AI049815NIGMS NIH HHS R01 GM100788
6 · The paper itself

Abstract

Ribosomal frameshifting, a process whereby a translating ribosome is diverted from one reading frame to another on a contiguous mRNA, is an important regulatory mechanism in biology and an opportunity for therapeutic intervention in several human diseases. In HIV, ribosomal frameshifting controls the ratio of Gag and Gag-Pol, two polyproteins critical to the HIV life cycle. We have previously reported compounds able to selectively bind an RNA stemloop within the Gag-Pol mRNA; these compounds alter the production of Gag-Pol in a manner consistent with increased frameshifting. Importantly, they also display antiretroviral activity in human T-cells. Here, we describe new compounds with significantly reduced molecular weight, but with substantially maintained affinity and anti-HIV activity. These results suggest that development of more "ligand efficient" enhancers of ribosomal frameshifting is an achievable goal.

Indexed as

Frameshift MutationHIV-1HumansLigandsRNA, ViralLigandsRNA, Viral

Identifiers

PMID31101492
PMCPMC6589821
OpenAlexW2944649119

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.