Evidence map›Paper›PMID 31123048›Full record

ArticleThe Plant cell2019

Ribonucleoprotein Capture by in Vivo Expression of a Designer Pentatricopeptide Repeat Protein in Arabidopsis.

James J McDermott, Kenneth P Watkins, Rosalind Williams-Carrier, Alice Barkan

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Opposing action of photosystem II assembly factors RBD1 and HCF136 underlies light-regulatedProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. The maizePlant direct · 2024
    Article
  14. Review
  15. Review
  16. Article
  17. Plant organellar RNA maturation.The Plant cell · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

James J McDermottInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403.ORCID 0000-0003-4044-5525
Kenneth P WatkinsInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403.ORCID 0000-0002-8599-0087
Rosalind Williams-CarrierInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403.ORCID 0000-0001-7408-9739
Alice BarkanInstitute of Molecular Biology, University of Oregon, Eugene, Oregon 97403 abarkan@uoregon.edu.ORCID 0000-0003-3049-2838
University of Oregon · US

Funding

MOLECULAR BIOLOGY AND BIOPHYSICST32GM007759 · NIGMS · UNIVERSITY OF OREGON · PI NOLEN, BRADLEY J · 1985 to 2021
$8.5M
NIGMS NIH HHS T32 GM007759
6 · The paper itself

Abstract

Pentatricopeptide repeat (PPR) proteins bind RNA via a mechanism that facilitates the customization of sequence specificity. However, natural PPR proteins have irregular features that limit the degree to which their specificity can be predicted and customized. We demonstrate here that artificial PPR proteins built from consensus PPR motifs selectively bind the intended RNA in vivo, and we use this property to develop a new tool for ribonucleoprotein characterization. We show by RNA coimmunoprecipitation sequencing (RIP-seq) that artificial PPR proteins designed to bind the Arabidopsis (

Indexed as

ArabidopsisArabidopsis ProteinsBinding SitesProtein BindingRibonucleoproteinsRNA, MessengerRNA, PlantArabidopsis ProteinsPDM2 protein, ArabidopsisRibonucleoproteinsRNA, MessengerRNA, Plant

Identifiers

PMID31123048
PMCPMC6713294
OpenAlexW2945460670

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.