Evidence map›Paper›PMID 31123713›Full record

ArticleCommunications biology2019

Extracellular vesicle microRNA quantification from plasma using an integrated microfluidic device.

Zeinab Ramshani, Chenguang Zhang, Katherine Richards, Lulu Chen, Geyang Xu, Bangyan L Stiles, Reginald Hill, Satyajyoti Senapati, David B Go, Hsueh-Chia Chang

Abstract readEvaluation Study
In one paragraph

Article in Communications biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zeinab Ramshani *1Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556 USA.
Chenguang Zhang *1Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556 USA.ORCID 0000-0001-5124-875X
Katherine Richards3Harper Cancer Research Institute, University of Notre Dame, Notre Dame, IN 46556 USA.
Lulu Chen5Pharmacology & Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA 90211 USA.ORCID 0000-0003-0167-4632
Geyang Xu6Department of Physiology, School of Medicine, Jinan University, Guangzhou, 510632 Guangdong China.
Bangyan L Stiles5Pharmacology & Pharmaceutical Sciences, School of Pharmacy, University of Southern California, Los Angeles, CA 90211 USA.
Reginald Hill7Lawrence J. Ellison Institute for Transformative Medicine of USC, University of Southern California, Beverly Hills, CA 90211 USA.
Satyajyoti Senapati1Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556 USA.
David B Go1Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556 USA.ORCID 0000-0001-8948-1442
Hsueh-Chia Chang1Department of Chemical and Biomolecular Engineering, University of Notre Dame, Notre Dame, IN 46556 USA.

Funding

USC RESEARCH CENTER FOR LIVER DISEASES: PILOT PROGRAMSP30DK048522 · NIDDK · UNIVERSITY OF SOUTHERN CALIFORNIA · PI KAPLOWITZ, NEIL · 1995 to 2020
$21.8M
The role of PTEN and AKT2 in the malignant transformation of liver progenitor celR01CA154986 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI STILES, BANGYAN · 2013 to 2017
$1.7M
An Integrated Microfluidics Platform for Rapid and Sensitive Exosome RNAR21HG009010 · NHGRI · UNIVERSITY OF NOTRE DAME · PI CHANG, HSUEH-CHIA, GO, DAVID B. · 2016 to 2017
$421k
NCI NIH HHS R01 CA154986NHGRI NIH HHS R21 HG009010NIDDK NIH HHS P30 DK048522
6 · The paper itself

Abstract

Extracellular vesicles (EV) containing microRNAs (miRNAs) have tremendous potential as biomarkers for the early detection of disease. Here, we present a simple and rapid PCR-free integrated microfluidics platform capable of absolute quantification (<10% uncertainty) of both free-floating miRNAs and EV-miRNAs in plasma with 1 pM detection sensitivity. The assay time is only 30 minutes as opposed to 13 h and requires only ~20 μL of sample as oppose to 1 mL for conventional RT-qPCR techniques. The platform integrates a surface acoustic wave (SAW) EV lysing microfluidic chip with a concentration and sensing microfluidic chip incorporating an electrokinetic membrane sensor that is based on non-equilibrium ionic currents. Unlike conventional RT-qPCR methods, this technology does not require EV extraction, RNA purification, reverse transcription, or amplification. This platform can be easily extended for other RNA and DNA targets of interest, thus providing a viable screening tool for early disease diagnosis, prognosis, and monitoring of therapeutic response.

Indexed as

Lab-On-A-Chip DevicesAnimalsBiomarkersEquipment DesignExtracellular VesiclesHumansLiver NeoplasmsMaleMiceMice, Inbred C57BLMice, KnockoutMicroRNAsReal-Time Polymerase Chain ReactionBiomarkersMicroRNAsMIRN21 microRNA, humanMIRN21 microRNA, mouseLab-on-a-chipmiRNAsRNA probes

Identifiers

PMID31123713
PMCPMC6527557

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.