Evidence map›Paper›PMID 31137536›Full record

ArticleGenes2019

Back to the Salt Mines: Genome and Transcriptome Comparisons of the Halophilic Fungus

Hakim Tafer, Caroline Poyntner, Ksenija Lopandic, Katja Sterflinger, Guadalupe Piñar

Open access · goldAbstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Material Composition Characteristics ofMolecules (Basel, Switzerland) · 2024
    Article
  2. Article
  3. Review
  4. Extremely chaotolerant and kosmotolerantFrontiers in microbiology · 2023
    Article
  5. Article
  6. Article
  7. Review
  8. Haloadaptative Responses ofJournal of fungi (Basel, Switzerland) · 2020
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hakim TaferVIBT EQ Extremophile Center, Department of Biotechnology, University of Natural Resources and Life Sciences, Muthgasse 18, 1190 Vienna, Austria. hakim.tafer@boku.ac.at.
Caroline PoyntnerVIBT EQ Extremophile Center, Department of Biotechnology, University of Natural Resources and Life Sciences, Muthgasse 18, 1190 Vienna, Austria. caroline.poyntner@boku.ac.at.
Ksenija LopandicVIBT EQ Extremophile Center, Department of Biotechnology, University of Natural Resources and Life Sciences, Muthgasse 18, 1190 Vienna, Austria. ksenija.lopandic@boku.ac.at.ORCID 0000-0003-2674-2849
Katja SterflingerVIBT EQ Extremophile Center, Department of Biotechnology, University of Natural Resources and Life Sciences, Muthgasse 18, 1190 Vienna, Austria. katja.sterflinger@boku.ac.at.ORCID 0000-0002-0296-6728
Guadalupe PiñarVIBT EQ Extremophile Center, Department of Biotechnology, University of Natural Resources and Life Sciences, Muthgasse 18, 1190 Vienna, Austria. caroline.poyntner@boku.ac.at.ORCID 0000-0001-7881-8572
BOKU University · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Salt mines are among the most extreme environments as they combine darkness, low nutrient availability, and hypersaline conditions. Based on comparative genomics and transcriptomics, we describe in this work the adaptive strategies of the true halophilic fungus

Indexed as

AspergillusAustriaComputational BiologyFungal ProteinsGene Expression ProfilingGenomeGenomicsHalobacterialesOsmotic PressurePhylogenyProteomeSalt ToleranceSodium ChlorideTranscriptomeFungal ProteinsProteomeSodium Chloridefungigenomicshalophileshalotoleranttranscriptomics

Identifiers

PMID31137536
PMCPMC6563132
OpenAlexW2945031023

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.