Evidence map›Paper›PMID 31157773›Full record

ArticleJournal of visualized experiments : JoVE2019

Lentiviral Mediated Gene Silencing in Human Pseudoislet Prepared in Low Attachment Plates.

Siming Liu, Mikako Harata, Joseph A Promes, Anthony J Burand, James A Ankrum, Yumi Imai

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
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  4. Review
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Siming LiuDepartment of Internal Medicine, Carver College of Medicine, University of Iowa; Fraternal Order of Eagles Diabetes Research Center, University of Iowa.
Mikako HarataDepartment of Internal Medicine, Carver College of Medicine, University of Iowa; Fraternal Order of Eagles Diabetes Research Center, University of Iowa.
Joseph A PromesDepartment of Internal Medicine, Carver College of Medicine, University of Iowa; Fraternal Order of Eagles Diabetes Research Center, University of Iowa.
Anthony J BurandFraternal Order of Eagles Diabetes Research Center, University of Iowa; Roy J. Carver Department of Biomedical Engineering, University of Iowa.
James A AnkrumFraternal Order of Eagles Diabetes Research Center, University of Iowa; Roy J. Carver Department of Biomedical Engineering, University of Iowa.
Yumi ImaiDepartment of Internal Medicine, Carver College of Medicine, University of Iowa; Fraternal Order of Eagles Diabetes Research Center, University of Iowa; yumi-imai@uiowa.edu.

Funding

The Human Islet Distribution Coordinating Center (UC4)UC4DK098085 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI EVANS-MOLINA, CARMELLA, NILAND, JOYCE CAROL · 2012 to 2017
$25.6M
Integrated Islet Distribution Program (U24) - 2021U24DK098085 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI Carmella Evans-Molina, Joyce Carol Niland · 2021 to 2026
$17.8M
Role of Lipid Droplet Proteins in Islet Function in Diabetes and ObesityR01DK090490 · NIDDK · UNIVERSITY OF IOWA · PI IMAI, YUMI · 2011 to 2025
$5.0M
Interdisciplinary Training Program in Pain ResearchT32NS045549 · NINDS · UNIVERSITY OF IOWA · PI KATHLEEN A SLUKA, Yuriy M Usachev · 2004 to 2026
$3.7M
NIDDK NIH HHS R01 DK090490NIDDK NIH HHS U24 DK098085NIDDK NIH HHS UC4 DK098085NINDS NIH HHS T32 NS045549
6 · The paper itself

Abstract

Various genetic tools are available to modulate genes in pancreatic islets of rodents to dissect function of islet genes for diabetes research. However, the data obtained from rodent islets are often not fully reproduced in or applicable to human islets due to well-known differences in islet structure and function between the species. Currently, techniques that are available to manipulate gene expression of human islets are very limited. Introduction of transgene into intact islets by adenovirus, plasmid, and oligonucleotides often suffers from low efficiency and high toxicity. Low efficiency is especially problematic in gene downregulation studies in intact islets, which require high efficiency. It has been known that enzymatically-dispersed islet cells reaggregate in culture forming spheroids termed pseudoislets. Size-controlled reaggregation of human islet cells creates pseudoislets that maintain dynamic first phase insulin secretion after prolonged culture and provide a window to efficiently introduce lentiviral short hairpin RNA (shRNA) with low toxicity. Here, a detailed protocol for the creation of human pseudoislets after lentiviral transduction using two commercially available multiwell plates is described. The protocol can be easily performed and allows for efficient downregulation of genes and assessment of dynamism of insulin secretion using human islet cells. Thus, human pseudoislets with lentiviral mediated gene modulation provide a powerful and versatile model to assess gene function within human islet cells.

Indexed as

Gene SilencingCells, CulturedGene ExpressionHumansInsulin SecretionIslets of LangerhansLentivirusRNA, Small InterferingRNA, ViralTransfectionTransgenesRNA, Small InterferingRNA, Viral

Identifiers

PMID31157773
PMCPMC6870219

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.