Evidence map›Paper›PMID 31170911›Full record

ArticleBMC plant biology2019

Comparative proteomic analysis provides novel insights into the regulation mechanism underlying papaya (Carica papaya L.) exocarp during fruit ripening process.

Bian Jiang, Siyan Ou, Ling Xu, Wanyi Mai, Meijun Ye, Haiping Gu, Tao Zhang, Changchun Yuan, Chenjia Shen, Jinxiang Wang and 1 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 21 citations in OpenAlex.

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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Bian JiangLife Science and Technology School, Lingnan Normal University, Zhanjiang, 524048, China.
Siyan OuRoot Biology Center, College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642, China.
Ling XuLife Science and Technology School, Lingnan Normal University, Zhanjiang, 524048, China.
Wanyi MaiLife Science and Technology School, Lingnan Normal University, Zhanjiang, 524048, China.
Meijun YeLife Science and Technology School, Lingnan Normal University, Zhanjiang, 524048, China.
Haiping GuLife Science and Technology School, Lingnan Normal University, Zhanjiang, 524048, China.
Tao ZhangLife Science and Technology School, Lingnan Normal University, Zhanjiang, 524048, China.
Changchun YuanLife Science and Technology School, Lingnan Normal University, Zhanjiang, 524048, China.
Chenjia ShenCollege of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, 310036, China.
Jinxiang WangRoot Biology Center, College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642, China. jinxwang@scau.edu.cn.
Kaidong LiuLife Science and Technology School, Lingnan Normal University, Zhanjiang, 524048, China. liukaidong2001@126.com.
Lingnan Normal University · CNSouth China Agricultural University · CNHangzhou Normal University · CN

Funding

College Student Climbing Program of Guangdong Province pdjh2019b0299Natural Science Foundation of Guangdong Province 2016A030307016Natural Science Foundation of Guangdong Province 2018A0303130161Science and Technology Program of Guangdong 2015A020208018Science and Technology Program of Guangdong 2017A040403069Science and Technology Project of Zhanjiang City 2016A03016
6 · The paper itself

Abstract

backgroundPapaya (Carica papaya L.) is a popular climacteric fruit, undergoing various physico-chemical changes during ripening. Although papaya is widely cultivated and consumed, few studies on the changes in metabolism during its ripening process at the proteasome level have been performed. Using a newly developed TMT-LCMS analysis, proteomes of papaya fruit at different ripening stages were investigated.

resultsIn total, 3220 proteins were identified, of which 2818 proteins were quantified. The differential accumulated proteins (DAPs) exhibited various biological functions and diverse subcellular localizations. The KEGG enrichment analysis showed that various metabolic pathways were significantly altered, particularly in flavonoid and fatty acid metabolisms. The up-regulation of several flavonoid biosynthesis-related proteins may provide more raw materials for pigment biosynthesis, accelerating the color variation of papaya fruit. Variations in the fatty acid metabolism- and cell wall degradation-related proteins were investigated during the ripening process. Furthermore, the contents of several important fatty acids were determined, and increased unsaturated fatty acids may be associated with papaya fruit volatile formation.

conclusionsOur data may give an intrinsic explanation of the variations in metabolism during the ripening process of papaya fruit.

Indexed as

Gene Expression Regulation, PlantProteomeCaricaFruitPlant ProteinsProteomicsPlant ProteinsProteomeDifferential expressed proteinFatty acid metabolismFruitHormonesPapayaRipening

Identifiers

PMID31170911
PMCPMC6554998
OpenAlexW2948636562

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.