Evidence map›Paper›PMID 31242866›Full record

ArticleBMC genomics2019

Grapevine comparative early transcriptomic profiling suggests that Flavescence dorée phytoplasma represses plant responses induced by vector feeding in susceptible varieties.

Nadia Bertazzon, Paolo Bagnaresi, Vally Forte, Elisabetta Mazzucotelli, Luisa Filippin, Davide Guerra, Antonella Zechini, Luigi Cattivelli, Elisa Angelini

Abstract readComparative Study
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Nadia BertazzonCREA Research Centre for Viticulture and Enology, 31015, Conegliano (TV), Italy. nadia.bertazzon@crea.gov.it.ORCID http://orcid.org/0000-0001-8947-9377
Paolo BagnaresiCREA Research Centre for Genomics and Bioinformatics, 29017, Fiorenzuola d'Arda (PC), Italy.
Vally ForteCREA Research Centre for Viticulture and Enology, 31015, Conegliano (TV), Italy.
Elisabetta MazzucotelliCREA Research Centre for Genomics and Bioinformatics, 29017, Fiorenzuola d'Arda (PC), Italy.
Luisa FilippinCREA Research Centre for Viticulture and Enology, 31015, Conegliano (TV), Italy.
Davide GuerraCREA Research Centre for Genomics and Bioinformatics, 29017, Fiorenzuola d'Arda (PC), Italy.
Antonella ZechiniCREA Research Centre for Genomics and Bioinformatics, 29017, Fiorenzuola d'Arda (PC), Italy.
Luigi CattivelliCREA Research Centre for Genomics and Bioinformatics, 29017, Fiorenzuola d'Arda (PC), Italy.
Elisa AngeliniCREA Research Centre for Viticulture and Enology, 31015, Conegliano (TV), Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFlavescence dorée is the most serious grapevine yellows disease in Europe. It is caused by phytoplasmas which are transmitted from grapevine to grapevine by the leafhopper Scaphoideus titanus. Differences in susceptibility among grapevine varieties suggest the existence of specific genetic features associated with resistance to the phytoplasma and/or possibly with its vector. In this work, RNA-Seq was used to compare early transcriptional changes occurring during the three-trophic interaction between the phytoplasma, its vector and the grapevine, represented by two different cultivars, one very susceptible to the disease and the other scarcely susceptible.

resultsThe comparative analysis of the constitutive transcriptomic profiles suggests the existence of passive defense strategies against the insect and/or the phytoplasma in the scarcely-susceptible cultivar. Moreover, the attack by the infective vector on the scarcely-susceptible variety prompted immediate and substantial transcriptomic changes that led to the rapid erection of further active defenses. On the other hand, in the most susceptible variety the response was delayed and mainly consisted of the induction of phytoalexin synthesis. Surprisingly, the jasmonic acid- and ethylene-mediated defense reactions, activated by the susceptible cultivar following FD-free insect feeding, were not detected in the presence of the phytoplasma-infected vector.

conclusionsThe comparison of the transcriptomic response in two grapevine varieties with different levels of susceptibility to Flavescence dorèe highlighted both passive and active defense mechanisms against the vector and/or the pathogen in the scarcely-susceptible variety, as well as the capacity of the phytoplasmas to repress the defense reaction against the insect in the susceptible variety.

Indexed as

Feeding BehaviorGene Expression ProfilingAnimalsAntioxidantsCell WallDisease SusceptibilityDisease VectorsGenomicsHemipteraPhytoplasmaPlant DiseasesPlant Growth RegulatorsPlant ProteinsRNA, MessengerSignal TransductionSpecies SpecificityAntioxidantsPlant Growth RegulatorsPlant ProteinsRNA, MessengerTranscription FactorsActive defenseFlavescence dorèeGrapevinePassive defenseRNA-SeqScaphoideus titanusVitis vinifera

Identifiers

PMID31242866
PMCPMC6595628

What Socratic holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.