Evidence map›Paper›PMID 31306413›Full record

ArticlePLoS genetics2019

Molecular dissection of the oncogenic role of ETS1 in the mesenchymal subtypes of head and neck squamous cell carcinoma.

Christian Gluck, Alexandra Glathar, Maria Tsompana, Norma Nowak, Lee Ann Garrett-Sinha, Michael J Buck, Satrajit Sinha

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. GINS2 promotes the progression of human HNSCC by altering RRM2 expression.Cancer biomarkers : section A of Disease markers · 2024
    Article
  9. Article
  10. Application of single-cell RNA sequencing in head and neck squamous cell carcinoma.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2023
    Article
  11. Review
  12. Super-enhancers complexes zoom in transcription in cancer.Journal of experimental & clinical cancer research : CR · 2023
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Function of AXL and molecular mechanisms in regulation of nasopharyngeal carcinoma.Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Christian GluckDepartment of Biochemistry, SUNY at Buffalo, Buffalo, NY, United States of America.ORCID 0000-0001-7437-7204
Alexandra GlatharDepartment of Biochemistry, SUNY at Buffalo, Buffalo, NY, United States of America.
Maria TsompanaDepartment of Biochemistry, SUNY at Buffalo, Buffalo, NY, United States of America.
Norma NowakDepartment of Biochemistry, SUNY at Buffalo, Buffalo, NY, United States of America.
Lee Ann Garrett-SinhaDepartment of Biochemistry, SUNY at Buffalo, Buffalo, NY, United States of America.
Michael J BuckDepartment of Biochemistry, SUNY at Buffalo, Buffalo, NY, United States of America.ORCID 0000-0001-5320-3678
Satrajit SinhaDepartment of Biochemistry, SUNY at Buffalo, Buffalo, NY, United States of America.ORCID 0000-0002-9574-4576
University at Buffalo, State University of New York · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Head and Neck Squamous Cell Carcinoma (HNSCC) is a heterogeneous disease of significant mortality and with limited treatment options. Recent genomic analysis of HNSCC tumors has identified several distinct molecular classes, of which the mesenchymal subtype is associated with Epithelial to Mesenchymal Transition (EMT) and shown to correlate with poor survival and drug resistance. Here, we utilize an integrated approach to characterize the molecular function of ETS1, an oncogenic transcription factor specifically enriched in Mesenchymal tumors. To identify the global ETS1 cistrome, we have performed integrated analysis of RNA-Seq, ChIP-Seq and epigenomic datasets in SCC25, a representative ETS1high mesenchymal HNSCC cell line. Our studies implicate ETS1 as a crucial regulator of broader oncogenic processes and specifically Mesenchymal phenotypes, such as EMT and cellular invasion. We found that ETS1 preferentially binds cancer specific regulator elements, in particular Super-Enhancers of key EMT genes, highlighting its role as a master regulator. Finally, we show evidence that ETS1 plays a crucial role in regulating the TGF-β pathway in Mesenchymal cell lines and in leading-edge cells in primary HNSCC tumors that are endowed with partial-EMT features. Collectively our study highlights ETS1 as a key regulator of TGF-β associated EMT and reveals new avenues for sub-type specific therapeutic intervention.

Indexed as

Cell Line, TumorCell MovementEpigenomicsEpithelial-Mesenchymal TransitionGene Expression ProfilingGene Expression Regulation, NeoplasticHead and Neck NeoplasmsHumansPrognosisProto-Oncogene Protein c-ets-1Sequence Analysis, RNASignal TransductionSingle-Cell AnalysisSquamous Cell Carcinoma of Head and NeckSurvival AnalysisTransforming Growth Factor betaETS1 protein, humanProto-Oncogene Protein c-ets-1Transforming Growth Factor beta

Identifiers

PMID31306413
PMCPMC6657958
OpenAlexW2956406238

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.