Evidence map›Paper›PMID 31308379›Full record

ArticleNature communications2019

SHB1 and CCA1 interaction desensitizes light responses and enhances thermomorphogenesis.

Qingbin Sun, Shulei Wang, Gang Xu, Xiaojun Kang, Min Zhang, Min Ni

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
9.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Ecological Adaptation Mechanisms Underlying Successful Plant Reproduction.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Clock protein LHY targetsScience advances · 2024
    Article
  13. Article
  14. Participation of miR165a in the Phytochrome Signal Transduction in Maize (International journal of molecular sciences · 2024
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Qingbin SunNational Key Laboratory of Crop biology, College of life Sciences, Shandong Agricultural University, Taian, 271018, China.ORCID http://orcid.org/0000-0001-8686-4421
Shulei WangNational Key Laboratory of Crop biology, College of life Sciences, Shandong Agricultural University, Taian, 271018, China.ORCID http://orcid.org/0000-0003-4798-5620
Gang XuNational Key Laboratory of Crop biology, College of life Sciences, Shandong Agricultural University, Taian, 271018, China.
Xiaojun KangDepartment of Plant and Microbial Biology, University of Minnesota at Twin Cities, Saint Paul, Minnesota, 55108, USA.
Min ZhangNational Key Laboratory of Crop biology, College of life Sciences, Shandong Agricultural University, Taian, 271018, China.ORCID http://orcid.org/0000-0002-7090-7260
Min NiDepartment of Plant and Microbial Biology, University of Minnesota at Twin Cities, Saint Paul, Minnesota, 55108, USA. nixxx008@umn.edu.ORCID http://orcid.org/0000-0001-7180-3319
Shandong Agricultural University · CNUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Light and temperature are two important environmental signals to plants. After dawn, photo-activated phytochromes translocate into the nucleus and interact with a family of negative basic helix-loop-helix PIF regulators. Subsequent phosphorylation and degradation of PIFs triggers a series of photomorphogenic responses. However, excess light can damage the photosynthetic apparatus and leads to photoinhibition. Plants acclimate to a balanced state of photomorphogenesis to avoid photodamage. Here, we show that upregulation of PIF4 expression by SHB1 and CCA1 under red light represents a desensitization step. After dawn, the highly expressed circadian clock protein CCA1 brings circadian signals to the regulatory region of the PIF4 signaling hub. Recruitment of SHB1 by CCA1 modulates red light-specific induction of PIF4 expression thus integrating circadian and light signals. As noon approaches and light intensity and ambient temperature tend to increase, the SHB1-CCA1 interaction sustains PIF4 expression to trigger thermomorphogenic responses to changing light and temperature conditions.

Indexed as

Light Signal TransductionAcclimatizationArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsDNA-Binding ProteinsGene Expression Regulation, PlantPhotosynthesisPhytochromeSunlightTemperatureTranscription FactorsArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsCCA1 protein, ArabidopsisDNA-Binding ProteinsLHY protein, ArabidopsisPhytochromePIF4 protein, ArabidopsisSHB1 protein, ArabidopsisTranscription Factors

Identifiers

PMID31308379
PMCPMC6629618
OpenAlexW2960242904

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.