Evidence map›Paper›PMID 31372182›Full record

ArticleGut pathogens2019

Differential transcriptome analysis of the disease tolerant Madagascar-Malaysia crossbred black tiger shrimp,

Tze Chiew Christie Soo, Sridevi Devadas, Mohamed Shariff Mohamed Din, Subha Bhassu

Open access · goldAbstract read
In one paragraph

Article in Gut pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 49 citations in OpenAlex.

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  12. Editorial: DAMPs Across the Tree of Life.Frontiers in immunology · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Tze Chiew Christie Soo1Department of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia.
Sridevi DevadasSelangor Fisheries Biosecurity Centre, Department of Fisheries, Malaysia, KLIA, 63000 Sepang, Selangor Malaysia.
Mohamed Shariff Mohamed Din4Institute of Bioscience, Universiti Putra Malaysia, 43400 Serdang, Selangor Malaysia.
Subha Bhassu1Department of Genetics and Molecular Biology, Institute of Biological Sciences, Faculty of Science, University of Malaya, 50603 Kuala Lumpur, Malaysia.
University of Malaya · MYUniversiti Putra Malaysia · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

background

methodsWe have employed high-throughput RNA-Seq technology to uncover the transcriptome changes of

resultsThe sequencing reads generated were filtered to obtain 312.77 Mb clean reads and assembled into 48662 Unigenes. Based on the DEGs pattern identified, it is inferred that the PAMPs carried by

conclusionsThe outcomes of this research correlate the different stages of

Indexed as

Acute hepatopancreatic necrosis disease (AHPND)DAMPsPAMPsPenaeus monodonShrimp innate immune responseTranscriptome analysis

Identifiers

PMID31372182
PMCPMC6660963
OpenAlexW2965591710

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.