Evidence map›Paper›PMID 31382980›Full record

ArticleCell communication and signaling : CCS2019

Palmitoylation is required for TNF-R1 signaling.

Philipp Zingler, Vinzenz Särchen, Timo Glatter, Lotta Caning, Carina Saggau, Rahul S Kathayat, Bryan C Dickinson, Dieter Adam, Wulf Schneider-Brachert, Stefan Schütze and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cell communication and signaling : CCS, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Palmitoylation in cardiovascular diseases: Molecular mechanism and therapeutic potential.International journal of cardiology. Heart & vasculature · 2025
    Review
  11. Review
  12. Review
  13. Review
  14. Article
  15. Mechanisms and functions of protein S-acylation.Nature reviews. Molecular cell biology · 2024
    Review
  16. Review
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Philipp ZinglerInstitute of Immunology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Vinzenz SärchenInstitute of Immunology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Timo GlatterFacility for Mass Spectrometry and Proteomics, MPI for Terrestrial Microbiology, Marburg, Germany.
Lotta CaningInstitute of Immunology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Carina SaggauInstitute of Immunology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Rahul S KathayatDepartment of Chemistry, University of Chicago, Chicago, USA.
Bryan C DickinsonDepartment of Chemistry, University of Chicago, Chicago, USA.
Dieter AdamInstitute of Immunology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Wulf Schneider-BrachertDepartment of Infection Prevention and Infectious Diseases, University of Regensburg, Franz-Josef-Strauss Allee 11, 93053, Regensburg, Germany.
Stefan SchützeInstitute of Immunology, Christian-Albrechts-University of Kiel, Kiel, Germany.
Jürgen FritschInstitute of Immunology, Christian-Albrechts-University of Kiel, Kiel, Germany. Juergen.Fritsch@ukr.de.ORCID 0000-0001-6909-6096
Christian-Albrechts-Universität zu Kiel · DEUniversity of Chicago · USMax Planck Institute for Terrestrial Microbiology · DEUniversity of Regensburg · DE

Funding

Rapid selection approaches to understand and reprogram proteins and peptidesR35GM119840 · NIGMS · UNIVERSITY OF CHICAGO · PI Bryan Dickinson · 2016 to 2026
$4.8M
NIGMS NIH HHS R35 GM119840
6 · The paper itself

Abstract

backgroundBinding of tumor necrosis factor (TNF) to TNF-receptor 1 (TNF-R1) can induce either cell survival or cell death. The selection between these diametrically opposed effects depends on the subcellular location of TNF-R1: plasma membrane retention leads to survival, while endocytosis leads to cell death. How the respective TNF-R1 associated signaling complexes are recruited to the distinct subcellular location is not known. Here, we identify palmitoylation of TNF-R1 as a molecular mechanism to achieve signal diversification.

methodsHuman monocytic U937 cells were analyzed. Palmitoylated proteins were enriched by acyl resin assisted capture (AcylRAC) and analyzed by western blot and mass spectrometry. Palmitoylation of TNF-R1 was validated by metabolic labeling. TNF induced depalmitoylation and involvement of APT2 was analyzed by enzyme activity assays, pharmacological inhibition and shRNA mediated knock-down. TNF-R1 palmitoylation site analysis was done by mutated TNF-R1 expression in TNF-R1 knock-out cells. Apoptosis (nuclear DNA fragmentation, caspase 3 assays), NF-κB activation and TNF-R1 internalization were used as biological readouts.

resultsWe identify dynamic S-palmitoylation as a new mechanism that controls selective TNF signaling. TNF-R1 itself is constitutively palmitoylated and depalmitoylated upon ligand binding. We identified the palmitoyl thioesterase APT2 to be involved in TNF-R1 depalmitoylation and TNF induced NF-κB activation. Mutation of the putative palmitoylation site C248 interferes with TNF-R1 localization to the plasma membrane and thus, proper signal transduction.

conclusionsOur results introduce palmitoylation as a new layer of dynamic regulation of TNF-R1 induced signal transduction at a very early step of the TNF induced signaling cascade. Understanding the underlying mechanism may allow novel therapeutic options for disease treatment in future.

Indexed as

LipoylationSignal TransductionCell LineGene Expression RegulationHumansNF-kappa BProtein TransportReceptors, Tumor Necrosis Factor, Type IThiolester HydrolasesLYPLA2 protein, humanNF-kappa BReceptors, Tumor Necrosis Factor, Type IThiolester HydrolasesCompartmentalizationDeath receptorNFκBPalmitoylationSignal transductionTNF-R1

Identifiers

PMID31382980
PMCPMC6683503
OpenAlexW2966058216

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.