Evidence map›Paper›PMID 31384004›Full record

ArticleNature microbiology2019

Transcriptome-wide dynamics of extensive m

Sebastian Baumgarten, Jessica M Bryant, Ameya Sinha, Thibaud Reyser, Peter R Preiser, Peter C Dedon, Artur Scherf

Open access · bronzeAbstract read
In one paragraph

Article in Nature microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 95 citations in OpenAlex.

  1. Review
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  3. NResearch (Washington, D.C.) · 2026
    Article
  4. Molecular mechanisms involved inFrontiers in microbiology · 2026
    Review
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  18. The RNA mFrontiers in cellular and infection microbiology · 2024
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Sebastian BaumgartenBiology of Host-Parasite Interactions Unit, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France. sebastian.baumgarten@pasteur.fr.ORCID http://orcid.org/0000-0003-2646-7699
Jessica M BryantBiology of Host-Parasite Interactions Unit, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.
Ameya SinhaSchool of Biological Sciences, Nanyang Technological University Singapore, Singapore, Singapore.
Thibaud ReyserBiology of Host-Parasite Interactions Unit, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.
Peter R PreiserSchool of Biological Sciences, Nanyang Technological University Singapore, Singapore, Singapore.
Peter C DedonAntimicrobial Resistance Interdisciplinary Research Group, Singapore-MIT Alliance for Research and Technology, Singapore, Singapore.
Artur ScherfBiology of Host-Parasite Interactions Unit, Department of Parasites and Insect Vectors, Institut Pasteur, Paris, France.ORCID http://orcid.org/0000-0003-2411-3328
Centre National de la Recherche Scientifique · FRNanyang Technological University · SGSingapore-MIT Alliance for Research and Technology · SG

Funding

European Research Council 670301
6 · The paper itself

Abstract

Malaria pathogenesis results from the asexual replication of Plasmodium falciparum within human red blood cells, which relies on a precisely timed cascade of gene expression over a 48-h life cycle. Although substantial post-transcriptional regulation of this hardwired program has been observed, it remains unclear how these processes are mediated on a transcriptome-wide level. To this end, we identified mRNA modifications in the P. falciparum transcriptome and performed a comprehensive characterization of N

Indexed as

TranscriptomeAdenosineCRISPR-Cas SystemsErythrocytesGene Expression RegulationGene Knockdown TechniquesGenes, ProtozoanHumansLife Cycle StagesMalaria, FalciparumMethylationMethyltransferasesPlasmodium falciparumProtozoan ProteinsRNA, MessengerAdenosineMethyltransferasesN-methyladenosineProtozoan ProteinsRNA, Messenger

Identifiers

PMID31384004
PMCPMC7611496
OpenAlexW2964782824

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.