Evidence map›Paper›PMID 31406241›Full record

ArticleScientific reports2019

Worldwide human mitochondrial haplogroup distribution from urban sewage.

Orsolya Anna Pipek, Anna Medgyes-Horváth, László Dobos, József Stéger, János Szalai-Gindl, Dávid Visontai, Rolf S Kaas, Marion Koopmans, Rene S Hendriksen, Frank M Aarestrup and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. A comprehensive database for biological data derived from sewage in five European cities.Database : the journal of biological databases and curation · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Orsolya Anna PipekDepartment of Physics of Complex Systems, ELTE Eötvös Loránd University, Pázmány P. s. 1A, Budapest, 1117, Hungary.ORCID http://orcid.org/0000-0001-8109-0340
Anna Medgyes-HorváthDepartment of Physics of Complex Systems, ELTE Eötvös Loránd University, Pázmány P. s. 1A, Budapest, 1117, Hungary.ORCID http://orcid.org/0000-0003-4435-5797
László DobosDepartment of Physics of Complex Systems, ELTE Eötvös Loránd University, Pázmány P. s. 1A, Budapest, 1117, Hungary.
József StégerDepartment of Physics of Complex Systems, ELTE Eötvös Loránd University, Pázmány P. s. 1A, Budapest, 1117, Hungary.
János Szalai-GindlDepartment of Information Systems, ELTE Eötvös Loránd University, Pázmány P. s. 1C, Budapest, 1117, Hungary.
Dávid VisontaiDepartment of Physics of Complex Systems, ELTE Eötvös Loránd University, Pázmány P. s. 1A, Budapest, 1117, Hungary.
Rolf S KaasNational Food Institute, Technical University of Denmark, Kgs., Lyngby, Denmark.ORCID http://orcid.org/0000-0002-5050-8668
Marion KoopmansViroscience department, Erasmus Medical Center, Rotterdam, The Netherlands.
Rene S HendriksenNational Food Institute, Technical University of Denmark, Kgs., Lyngby, Denmark.
Frank M AarestrupNational Food Institute, Technical University of Denmark, Kgs., Lyngby, Denmark.ORCID http://orcid.org/0000-0002-7116-2723
István CsabaiDepartment of Physics of Complex Systems, ELTE Eötvös Loránd University, Pázmány P. s. 1A, Budapest, 1117, Hungary. csabai@complex.elte.hu.ORCID http://orcid.org/0000-0001-9232-9898

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Community level genetic information can be essential to direct health measures and study demographic tendencies but is subject to considerable ethical and legal challenges. These concerns become less pronounced when analyzing urban sewage samples, which are ab ovo anonymous by their pooled nature. We were able to detect traces of the human mitochondrial DNA (mtDNA) in urban sewage samples and to estimate the distribution of human mtDNA haplogroups. An expectation maximization approach was used to determine mtDNA haplogroup mixture proportions for samples collected at each different geographic location. Our results show reasonable agreement with both previous studies of ancient evolution or migration and current US census data; and are also readily reproducible and highly robust. Our approach presents a promising alternative for sample collection in studies focusing on the ethnic and genetic composition of populations or diseases associated with different mtDNA haplogroups and genotypes.

Indexed as

HaplotypesSewageUrban PopulationDNA, MitochondrialEvolution, MolecularHumansPhylogenyPrincipal Component AnalysisReproducibility of ResultsStochastic ProcessesDNA, MitochondrialSewage

Identifiers

PMID31406241
PMCPMC6690936

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.