Evidence map›Paper›PMID 31411076›Full record

ArticleAmerican journal of physiology. Renal physiology2019

LC-MS-based metabolomics analysis to identify meprin-β-associated changes in kidney tissue from mice with STZ-induced type 1 diabetes and diabetic kidney injury.

Jessica Gooding, Lei Cao, Faihaa Ahmed, Jean-Marie Mwiza, Mizpha Fernander, Courtney Whitaker, Zach Acuff, Susan McRitchie, Susan Sumner, Elimelda Moige Ongeri

Open access · bronzeAbstract read
In one paragraph

Article in American journal of physiology. Renal physiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. The Biochemical Pathways of Nicotinamide-Derived Pyridones.International journal of molecular sciences · 2021
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jessica GoodingNational Institutes of Health Common Fund Eastern Regional Comprehensive Metabolomics Resource Core, RTI International, Research Park, North Carolina.
Lei CaoDepartment of Biology, North Carolina A&T State University, Greensboro, North Carolina.
Faihaa AhmedDepartment of Biology, North Carolina A&T State University, Greensboro, North Carolina.
Jean-Marie MwizaDepartment of Biology, North Carolina A&T State University, Greensboro, North Carolina.
Mizpha FernanderDepartment of Biology, North Carolina A&T State University, Greensboro, North Carolina.
Courtney WhitakerNational Institutes of Health Common Fund Eastern Regional Comprehensive Metabolomics Resource Core, RTI International, Research Park, North Carolina.
Zach AcuffNational Institutes of Health Common Fund Eastern Regional Comprehensive Metabolomics Resource Core, RTI International, Research Park, North Carolina.
Susan McRitchieNational Institutes of Health Common Fund Eastern Regional Comprehensive Metabolomics Resource Core, RTI International, Research Park, North Carolina.
Susan SumnerNational Institutes of Health Common Fund Eastern Regional Comprehensive Metabolomics Resource Core, RTI International, Research Park, North Carolina.
Elimelda Moige OngeriDepartment of Biology, North Carolina A&T State University, Greensboro, North Carolina.
North Carolina Agricultural and Technical State University · USNIH Common FundRTI International · US

Funding

North Carolina Translational & Clinical Sciences Institute (NC TraCS)UL1TR001111 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BUSE, JOHN BERNARD, CAREY, TIMOTHY S · 2013 to 2017
$43.9M
The Hampton University regional Transdisciplinary Collaborative CenterU54MD008621 · NIMHD · HAMPTON UNIVERSITY · PI SAMUEL, RAYMOND E · 2013 to 2017
$13.5M
RTI's Regional Comprehensive Metabolomics Resource CenterU24DK097193 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SUMNER, SUSAN J · 2012 to 2017
$9.8M
Meprin Metalloproteases in Kidney InjurySC1GM118271 · NIGMS · NORTH CAROLINA AGRI & TECH ST UNIV · PI ONGERI, ELIMELDA MOIGE · 2017 to 2020
$1.4M
Role of Meprins in Ischemia Reperfusion induced renal injurySC3GM102049 · NIGMS · NORTH CAROLINA AGRI & TECH ST UNIV · PI ONGERI, ELIMELDA MOIGE · 2012 to 2015
$421k
Metabolic Regulators of Insulin Secretion and Insulin ResistanceK01GM109320 · NIGMS · RESEARCH TRIANGLE INSTITUTE · PI GOODING, JESSICA RENEE · 2013 to 2016
$394k
NCATS NIH HHS UL1 TR001111NIDDK NIH HHS U24 DK097193NIGMS NIH HHS K01 GM109320NIGMS NIH HHS SC1 GM118271NIGMS NIH HHS SC3 GM102049NIMHD NIH HHS U54 MD008621
6 · The paper itself

Abstract

Meprin metalloproteases have been implicated in the pathophysiology of diabetic kidney disease (DKD). Single-nucleotide polymorphisms in the meprin-β gene have been associated with DKD in Pima Indians, a Native American ethnic group with an extremely high prevalence of DKD. In African American men with diabetes, urinary meprin excretion positively correlated with the severity of kidney injury. In mice, meprin activity decreased at the onset of diabetic kidney injury. Several studies have identified meprin targets in the kidney. However, it is not known how proteolytic processing of the targets by meprins impacts the metabolite milieu in kidneys. In the present study, global metabolomics analysis identified differentiating metabolites in kidney tissues from wild-type and meprin-β knockout mice with streptozotocin (STZ)-induced type 1 diabetes. Kidney tissues were harvested at 8 wk post-STZ and analyzed by hydrophilic interaction liquid chromatography ultra-performance liquid chromatography-quadrupole time-of-flight mass spectrometry. Principal component analysis identified >200 peaks associated with diabetes. Meprin expression-associated metabolites with strong variable importance of projection scores were indoxyl sulfate,

Indexed as

AnimalsBiomarkersChromatography, LiquidDiabetes Mellitus, ExperimentalDiabetes Mellitus, Type 2Diabetic NephropathiesKidneyMaleMetabolomicsMetalloendopeptidasesMiceMice, Inbred C57BLMice, KnockoutPeroxisome ProliferatorsTandem Mass SpectrometryBiomarkersmeprin AMetalloendopeptidasesPeroxisome Proliferatorsdiabetic kidney injurymeprin metalloproteasesmeprin βmetabolitesstreptozotocin

Identifiers

PMID31411076
PMCPMC6843037
OpenAlexW2967681949

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.