Evidence map›Paper›PMID 31420662›Full record

ArticleJournal of experimental botany2019

GABA operates upstream of H+-ATPase and improves salinity tolerance in Arabidopsis by enabling cytosolic K+ retention and Na+ exclusion.

Nana Su, Qi Wu, Jiahui Chen, Lana Shabala, Axel Mithöfer, Haiyang Wang, Mei Qu, Min Yu, Jin Cui, Sergey Shabala

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
14.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 130 citations in OpenAlex.

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  18. Truncation of the calmodulin binding domain in rice glutamate decarboxylase 4 (Molecular breeding : new strategies in plant improvement · 2024
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  19. GABA: a key player of abiotic stress regulation.Plant signaling & behavior · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Nana SuCollege of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Qi WuTasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Hobart, Tasmania 7001, Australia.
Jiahui ChenCollege of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Lana ShabalaTasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Hobart, Tasmania 7001, Australia.
Axel MithöferResearch Group of Plant Defense Physiology, Max Planck Institute for Chemical Ecology, D-07745 Jena, Germany.
Haiyang WangTasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Hobart, Tasmania 7001, Australia.
Mei QuTasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Hobart, Tasmania 7001, Australia.
Min YuInternational Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China.
Jin CuiCollege of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Sergey ShabalaTasmanian Institute for Agriculture, College of Science and Engineering, University of Tasmania, Hobart, Tasmania 7001, Australia.
University of Tasmania · AUNanjing Agricultural University · CNFoshan University · CNMax Planck Institute for Chemical Ecology · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The non-protein amino acid γ-aminobutyric acid (GABA) rapidly accumulates in plant tissues in response to salinity. However, the physiological rationale for this elevation remains elusive. This study compared electrophysiological and whole-plant responses of salt-treated Arabidopsis mutants pop2-5 and gad1,2, which have different abilities to accumulate GABA. The pop2-5 mutant, which was able to overaccumulate GABA in its roots, showed a salt-tolerant phenotype. On the contrary, the gad1,2 mutant, lacking the ability to convert glutamate to GABA, showed oversensitivity to salinity. The greater salinity tolerance of the pop2-5 line was explained by: (i) the role of GABA in stress-induced activation of H+-ATPase, thus leading to better membrane potential maintenance and reduced stress-induced K+ leak from roots; (ii) reduced rates of net Na+ uptake; (iii) higher expression of SOS1 and NHX1 genes in the leaves, which contributed to reducing Na+ concentration in the cytoplasm by excluding Na+ to apoplast and sequestering Na+ in the vacuoles; (iv) a lower rate of H2O2 production and reduced reactive oxygen species-inducible K+ efflux from root epidermis; and (v) better K+ retention in the shoot associated with the lower expression level of GORK channels in plant leaves.

Indexed as

ArabidopsisBiomassCell Survivalgamma-Aminobutyric AcidGene Expression Regulation, PlantHydrogen PeroxideIonsMembrane PotentialsMutationOxidative StressPlant EpidermisPlant RootsPlant ShootsPotassiumProton-Translocating ATPasesSalinitygamma-Aminobutyric AcidHydrogen PeroxideIonsPotassiumProton-Translocating ATPasesSodiumArabidopsisH+-ATPasehydrogen peroxidepotassium retentionreactive oxygen speciessodium sequestration

Identifiers

PMID31420662
PMCPMC6859739
OpenAlexW2968638922

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.