Evidence map›Paper›PMID 31666375›Full record

ArticleJournal of virology2020

USP7-Dependent Regulation of TRAF Activation and Signaling by a Viral Interferon Regulatory Factor Homologue.

Qiwang Xiang, Hyunwoo Ju, John Nicholas

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Qiwang XiangSidney Kimmel Comprehensive Cancer Center at Johns Hopkins, Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Hyunwoo JuSidney Kimmel Comprehensive Cancer Center at Johns Hopkins, Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
John NicholasSidney Kimmel Comprehensive Cancer Center at Johns Hopkins, Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, Maryland, USA nichojo@jhmi.edu.
Sidney Kimmel Comprehensive Cancer Center · USJohns Hopkins University · US

Funding

USP7 targeting by HHV-8 vIRFsR01AI140855 · NIAID · JOHNS HOPKINS UNIVERSITY · PI NICHOLAS, JOHN · 2019 to 2023
$2.0M
HHV-8 vIRF interactions in the context of infectionR21CA196348 · NCI · JOHNS HOPKINS UNIVERSITY · PI NICHOLAS, JOHN · 2015 to 2016
$388k
NCI NIH HHS R21 CA196348NIAID NIH HHS R01 AI140855
6 · The paper itself

Abstract

Human herpesvirus 8 (HHV-8) encodes four viral interferon regulatory factors (vIRFs 1 to 4), all of which are expressed during lytic replication and inhibit a variety of antiviral signaling pathways. Viral IRFs 1, 2, and 3 are also expressed during latency in primary effusion lymphoma (PEL) cells, and vIRF-1 and vIRF-3 have been reported to promote PEL cell viability. Viral IRFs 1, 3, and 4 are known to interact with ubiquitin-specific protease 7 (USP7); interactions of vIRF-1 and vIRF-3 with USP7 promote PEL cell viability and regulate productive replication. Here, we report that vIRF-2 also targets USP7, utilizing a PSTS motif matching the USP7 N-terminal domain-binding A/PxxS consensus, but uniquely requires catalytic domain residues for intracellular interaction. In functional and mechanistic analyses, tumor necrosis factor receptor-associated factor (TRAF)-mediated signaling and associated polyubiquitination of TRAFs 3 and 6, specifically, were regulated negatively by USP7 and positively by vIRF-2-USP7 interaction, the latter competing for USP7-TRAF association. Using depletion, depletion-complementation, and targeted mutagenesis approaches, vIRF-2 was determined to promote latent PEL cell viability, likely independently of USP7 interaction, while lytic replication was inhibited by vIRF-2, in part or in whole via USP7 interaction. Together, our data identify a new molecular determinant of USP7 recognition, TRAF3/6-specific targeting by the deubiquitinase, associated activation of these TRAFs by vIRF-2, and activities of vIRF-2 and vIRF-2-USP7 interaction in HHV-8 latent and lytic biology.

Indexed as

Gene DeletionHEK293 CellsHerpesvirus 8, HumanHumansInterferon Regulatory FactorsIntracellular Signaling Peptides and ProteinsTNF Receptor-Associated Factor 3Ubiquitin-Specific Peptidase 7Viral ProteinsVirus LatencyInterferon Regulatory FactorsIntracellular Signaling Peptides and ProteinsTifab protein, humanTNF Receptor-Associated Factor 3TRAF3 protein, humanUbiquitin-Specific Peptidase 7USP7 protein, humanviral interferon regulatory factorsViral Proteinsherpesvirus-associated ubiquitin-specific proteasehuman herpesvirus 8latencyreplicationTRAF3TRAF6tumor necrosis factor receptor-associated factorsubiquitin-specific protease 7viral interferon regulatory factor-2

Identifiers

PMID31666375
PMCPMC6955280
OpenAlexW2985617590

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.