Evidence map›Paper›PMID 31695113›Full record

ArticleScientific reports2019

Genome-wide transcriptional profiling for elucidating the effects of brassinosteroids on Glycine max during early vegetative development.

Li Song, Wei Chen, Qiuming Yao, Binhui Guo, Babu Valliyodan, Zhiyong Wang, Henry T Nguyen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 19 citations in OpenAlex.

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  5. Deciphering the Genetic Basis of Root and Biomass Traits in Rapeseed (International journal of molecular sciences · 2022
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  8. Engineered Nanomaterials Suppress the Soft Rot Disease (Nanomaterials (Basel, Switzerland) · 2021
    Article
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  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Li SongJoint International Research Laboratory of Agriculture and Agri-Product Safety, Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Yangzhou University, Yangzhou, 225009, China. songli@yzu.edu.cn.
Wei ChenDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Qiuming YaoDepartment of Computer Science, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA.
Binhui GuoJoint International Research Laboratory of Agriculture and Agri-Product Safety, Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Yangzhou University, Yangzhou, 225009, China.
Babu ValliyodanDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Zhiyong WangDepartment of Plant Biology, Carnegie Institution for Science, Stanford, CA, 94305, USA.ORCID http://orcid.org/0000-0003-4602-3390
Henry T NguyenDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA. nguyenhenry@missouri.edu.ORCID http://orcid.org/0000-0002-7597-1800
University of Missouri · USYangzhou University · CNCarnegie Institution for Science · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Soybean is a widely grown grain legume and one of the most important economic crop species. Brassinosteroids play a crucial role in plant vegetative growth and reproductive development. However, it remains unclear how BRs regulate the developmental processes in soybean, and the molecular mechanism underlying soybean early development is largely unexplored. In this study, we first characterized how soybean early vegetative growth was specifically regulated by the BR biosynthesis inhibitor propiconazole; this characterization included shortened root and shoot lengths, reduced leaf area, and decreased chlorophyll content. In addition, the growth inhibition induced by Pcz could be rescued by exogenous brassinolide application. The RNA-seq technique was employed to investigate the BR regulatory networks during soybean early vegetative development. Identification and analysis of differentially expressed genes indicated that BRs orchestrate a wide range of cellular activities and biological processes in soybean under various BR concentrations. The regulatory networks between BRs and multiple hormones or stress-related pathways were investigated. The results provide a comprehensive view of the physiological functions of BRs and new insights into the molecular mechanisms at the transcriptional level of BR regulation of soybean early development.

Indexed as

Genome, PlantBrassinosteroidsGene Expression Regulation, PlantGlycine maxPlant Growth RegulatorsPlant ProteinsTriazolesBrassinosteroidsPlant Growth RegulatorsPlant ProteinspropiconazoleTriazoles

Identifiers

PMID31695113
PMCPMC6834599
OpenAlexW2988110450

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.