Evidence map›Paper›PMID 31766757›Full record

ArticleGenes2019

Phylostratigraphic Analysis Shows the Earliest Origination of the Abiotic Stress Associated Genes in

Zakhar S Mustafin, Vladimir I Zamyatin, Dmitrii K Konstantinov, Aleksej V Doroshkov, Sergey A Lashin, Dmitry A Afonnikov

Abstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Transcriptomic Data Meta-Analysis Sheds Light on High Light Response inInternational journal of molecular sciences · 2022
    Pooled it
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  12. Gene Networks Involved in Plant Heat Stress Response and Tolerance.International journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Zakhar S MustafinThe Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences (IC & G SB RAS), 630090 Novosibirsk, Russia.
Vladimir I ZamyatinThe Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences (IC & G SB RAS), 630090 Novosibirsk, Russia.
Dmitrii K KonstantinovThe Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences (IC & G SB RAS), 630090 Novosibirsk, Russia.
Aleksej V DoroshkovThe Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences (IC & G SB RAS), 630090 Novosibirsk, Russia.
Sergey A LashinThe Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences (IC & G SB RAS), 630090 Novosibirsk, Russia.ORCID 0000-0003-3138-381X
Dmitry A AfonnikovThe Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences (IC & G SB RAS), 630090 Novosibirsk, Russia.ORCID 0000-0001-9738-1409

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants constantly fight with stressful factors as high or low temperature, drought, soil salinity and flooding. Plants have evolved a set of stress response mechanisms, which involve physiological and biochemical changes that result in adaptive or morphological changes. At a molecular level, stress response in plants is performed by genetic networks, which also undergo changes in the process of evolution. The study of the network structure and evolution may highlight mechanisms of plants adaptation to adverse conditions, as well as their response to stresses and help in discovery and functional characterization of the stress-related genes. We performed an analysis of

Indexed as

Gene Regulatory NetworksArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantGenes, PlantStress, PhysiologicalArabidopsis Proteinsabiotic stressA. thalianadivergencegene family evolutiongene networkmultifunctional genesnetwork structurephylostratigraphic analysis

Identifiers

PMID31766757
PMCPMC6947294

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.