Evidence map›Paper›PMID 31823830›Full record

ArticleClinical epigenetics2019

Overall and sex-specific associations between methylation of the ABCG1 and APOE genes and ischemic stroke or other atherosclerosis-related traits in a sibling study of Chinese population.

Xueying Qin, Jin Li, Tao Wu, Yiqun Wu, Xun Tang, Pei Gao, Lin Li, Mengying Wang, Yao Wu, Xiaowen Wang and 2 more

Open access · goldAbstract read
In one paragraph

Article in Clinical epigenetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 48 citations in OpenAlex.

  1. Pooled it
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  7. Review
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  10. Review
  11. Review
  12. Epigenetic regulation of sex dimorphism in cardiovascular health.Canadian journal of physiology and pharmacology · 2024
    Review
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  14. Correlation BetweenClinical interventions in aging · 2023
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  15. Association betweenFrontiers in neurology · 2023
    Article
  16. Article
  17. Article
  18. Article
  19. Genomic Variants and Multilevel Regulation ofJournal of cardiovascular development and disease · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Xueying QinDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China. xueyingqin@bjmu.edu.cn.ORCID 0000-0003-3271-8618
Jin LiDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Tao WuDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Yiqun WuDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Xun TangDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Pei GaoDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Lin LiDepartment of Endocrinology, The PLA Rocket Force Characteristic Medical Center, Beijing, 100085, China.
Mengying WangDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Yao WuDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Xiaowen WangDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Dafang ChenDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China.
Yonghua HuDepartment of Epidemiology and Biostatistics, School of Public Health, Peking University, Beijing, 100191, China. yhhu@bjmu.edu.cn.
Peking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIdentifying subjects with a high risk of ischemic stroke is fundamental for prevention of the disease. Both genetic and environmental risk factors contribute to ischemic stroke, but the underlying epigenetic mechanisms which mediate genetic and environmental risk effects are not fully understood. The aim of this study was to explore whether DNA methylation loci located in the ATP-binding cassette G1 (ABCG1) and apolipoprotein E (APOE) genes, both involved in the metabolism of lipids in the body, are related to ischemic stroke, using the Fangshan/Family-based Ischemic Stroke Study in China. We also tested if these CpG sites were associated with early signs of cardiovascular atherosclerosis (carotid intima-media thickness (cIMT), ankle-brachial index (ABI), and brachial-ankle pulse wave velocity (baPWV)).

resultsDNA methylation at the cg02494239 locus in ABCG1 was correlated with ischemic stroke after adjusting for gender, previous history of diabetes and hypertension, smoking, drinking, body mass index, and blood lipid levels (above vs below mean, OR = 2.416, 95% CI 1.024-5.700, P = 0.044; 75-100% percentile vs 0-25% percentile, OR = 4.461, 95% CI 1.226-16.225, P = 0.023). No statistically significant associations were observed for the cg06500161 site in ABCG1 and the cg14123992 site in APOE with ischemic stroke. The study detected that hypermethylation of the ABCG1 gene was significantly associated with cIMT, hypermethylation of the APOE gene was significantly related to ABI, and methylation of the APOE gene was statistically negatively correlated with baPWV. The above relationships demonstrated gender differences.

conclusionsThese findings suggest that epigenetic modification of ABCG1 and APOE may play a role in the pathway from disturbed blood lipid levels to the development of cardiovascular diseases. Future prospective validation of these findings is warranted.

Indexed as

DNA MethylationAgedApolipoproteins EAtherosclerosisATP Binding Cassette Transporter, Subfamily G, Member 1Brain IschemiaCarotid Intima-Media ThicknessChinaEpigenesis, GeneticFemaleGenetic Association StudiesHumansMaleMiddle AgedPulse Wave AnalysisStrokeABCG1 protein, humanApoE protein, humanApolipoproteins EATP Binding Cassette Transporter, Subfamily G, Member 1Apolipoprotein EAtherosclerosisATP-binding cassette G1DNA methylationIschemic stroke

Identifiers

PMID31823830
PMCPMC6902418
OpenAlexW2995606438

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.