Evidence map›Paper›PMID 31837371›Full record

ArticleThe Journal of allergy and clinical immunology2020

Noncanonical autophagy in dermal dendritic cells mediates immunosuppressive effects of UV exposure.

Payel Sil, Jutamas Suwanpradid, Ginger Muse, Artiom Gruzdev, Liwen Liu, David L Corcoran, Cynthia J Willson, Kyathanahalli Janardhan, Sara Grimm, Page Myers and 3 more

RetractedOpen access · greenAbstract readRetracted Publication
In one paragraph

Article in The Journal of allergy and clinical immunology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Payel SilImmunity, Inflammation, and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC.
Jutamas SuwanpradidDepartment of Dermatology, Duke University, Durham, NC.
Ginger MuseImmunity, Inflammation, and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC.
Artiom GruzdevKnockout Mouse Core Laboratory, Reproductive and Developmental Biology Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC.
Liwen LiuMolecular Genomics Core Laboratory, Signal Transduction Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC.
David L CorcoranDuke Center for Genomic and Computational Biology, Duke University Medical Center, Durham, NC.
Cynthia J WillsonIntegrated Laboratory Systems, Inc, Research Triangle Park, NC.
Kyathanahalli JanardhanIntegrated Laboratory Systems, Inc, Research Triangle Park, NC.
Sara GrimmDivision of Intramural Research, Research Triangle Park, NC.
Page MyersComparative Medicine Branch, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC.
Laura Miller DegraffImmunity, Inflammation, and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC.
Amanda S MacLeodDepartment of Dermatology, Duke University, Durham, NC; Department of Immunology, Duke University, Durham, NC; Department of Molecular Genetics and Microbiology, Duke University, Durham, NC.
Jennifer MartinezImmunity, Inflammation, and Disease Laboratory, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC. Electronic address: jennifer.martinez3@nih.gov.
National Institutes of Health · USDuke University · USTriangle · USDuke Medical Center · USResearch Triangle Park Foundation · US

Funding

Gene Expression and MicroarraysZICES102445 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI GERRISH, KEVIN · 2009 to 2025
$31.6M
Characterization of the molecular mechanisms of LC3-associated phagocytosis and its role in disease pathogenesisZIAES103286 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI MARTINEZ, JENNIFER · 2015 to 2021
$9.2M
Intramural NIH HHS Z99 ES999999Intramural NIH HHS ZIA ES103286
6 · The paper itself

Abstract

backgroundControl of the inflammatory response is critical to maintaining homeostasis, and failure to do so contributes to the burden of chronic inflammation associated with several disease states. The mechanisms that underlie immunosuppression, however, remain largely unknown. Although defects in autophagy machinery have been associated with inflammatory pathologic conditions, we now appreciate that autophagic components participate in noncanonical pathways distinct from classical autophagy. We have previously demonstrated that LC3-associated phagocytosis (LAP), a noncanonical autophagic process dependent on Rubicon (rubicon autophagy regulator [RUBCN]), contributes to immunosuppression.

objectiveWe used Rubcn

methodsFlow cytometry and transcriptional analysis were used to measure immune cell infiltration and activation in the skin of Rubcn

resultsHere, we demonstrate that LAP is required for UV-induced immunosuppression and that UV exposure induces a broadly anti-inflammatory transcriptional program dependent on Rubicon. Rubcn

conclusionsLAP functions to limit the immune response and is critical in maintaining the balance between homeostasis and inflammation.

Indexed as

AutophagyImmune ToleranceUltraviolet RaysAnimalsAutophagy-Related ProteinsDendritic CellsDermatitis, ContactFemaleMice, TransgenicPhagocytosisRadiation ExposureSkinAutophagy-Related Proteinsantigen presentationAutophagycontact hypersensitivitydendritic cellsefferocytosisinflammationLAPRubicon

Identifiers

PMID31837371
PMCPMC7214202
OpenAlexW2995284854

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.