Evidence map›Paper›PMID 31844829›Full record

ArticleJBMR plus2019

Genetic Dissection of Femoral and Tibial Microarchitecture.

Lu Lu, Jinsong Huang, Fuyi Xu, Zhousheng Xiao, Jing Wang, Bing Zhang, Nicolae Valentin David, Danny Arends, Weikuan Gu, Cheryl Ackert-Bicknell and 4 more

Open access · goldAbstract read
In one paragraph

Article in JBMR plus, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Lu LuDepartment of Genetics, Genomics and Informatics University of Tennessee Health Science Center Memphis TN USA.
Jinsong HuangDepartment of Genetics, Genomics and Informatics University of Tennessee Health Science Center Memphis TN USA.
Fuyi XuDepartment of Genetics, Genomics and Informatics University of Tennessee Health Science Center Memphis TN USA.
Zhousheng XiaoDepartment of Medicine University of Tennessee Health Science Center Memphis TN USA.
Jing WangDepartment of Molecular and Human Genetics Baylor College of Medicine Houston TX USA.
Bing ZhangDepartment of Molecular and Human Genetics Baylor College of Medicine Houston TX USA.
Nicolae Valentin DavidDepartment of Medicine Northwestern University Feinberg School of Medicine Chicago IL USA.
Danny ArendsBreeding Biology and Molecular Animal Breeding Humboldt University Berlin Germany.
Weikuan GuDepartment of Orthopaedic Surgery and Biomedical Engineering University of Tennessee Health Science Center Memphis TN USA.
Cheryl Ackert-BicknellCenter for Musculoskeletal Research University of Rochester Rochester NY USA.
Olivia L SabikCenter for Public Health Genomics University of Virginia Charlottesville VA USA.
Charles R FarberCenter for Public Health Genomics University of Virginia Charlottesville VA USA.
Leigh Darryl QuarlesDepartment of Medicine University of Tennessee Health Science Center Memphis TN USA.
Robert W WilliamsDepartment of Genetics, Genomics and Informatics University of Tennessee Health Science Center Memphis TN USA.
University of Tennessee Health Science Center · USBaylor College of Medicine · USUniversity of Virginia · USHumboldt-Universität zu Berlin · DENorthwestern University · USUniversity of Rochester · US

Funding

A Unified High Performance Web Service for Systems Genetics and Precision MedicineR01GM123489 · NIGMS · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI PRINS, PJOTR, SEN, SAUNAK · 2017 to 2024
$3.7M
Translational Systems Genetics of Mitochondria, Metabolism, and AgingR01AG043930 · NIA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI WILLIAMS, ROBERT W. · 2013 to 2017
$2.5M
Genetic Modulation of Hypertrophic Cardiomyopathy SeverityR01HL128350 · NHLBI · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI LU, LU, SUN, YAO · 2016 to 2019
$2.0M
Skeletal Functions of Polycystins and TAZR01AR071930 · NIAMS · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI XIAO, ZHOUSHENG · 2018 to 2022
$1.6M
NHLBI NIH HHS R01 HL128350NIAMS NIH HHS R01 AR071930NIA NIH HHS R01 AG043930NIGMS NIH HHS R01 GM123489
6 · The paper itself

Abstract

Our understanding of the genetic control of bone strength has relied mainly on estimates of bone mineral density. Here we have mapped genetic factors that influence femoral and tibial microarchitecture using high-resolution x-ray computed tomography (8-μm isotropic voxels) across a family of 61 BXD strains of mice, roughly 10 isogenic cases per strain and balanced by sex. We computed heritabilities for 25 cortical and trabecular traits. Males and females have well-matched heritabilities, ranging from 0.25 to 0.75. We mapped 16 genetic loci most of which were detected only in females. There is also a bias in favor of loci that control cortical rather than trabecular bone. To evaluate candidate genes, we combined well-established gene ontologies with bone transcriptome data to compute bone-enrichment scores for all protein-coding genes. We aligned candidates with those of human genome-wide association studies. A subset of 50 strong candidates fell into three categories: (1) experimentally validated genes already known to modulate bone function (

Indexed as

ANIMAL MODEL; CORTICAL BONE; GENE ONTOLOGY; GENOME‐WIDE ASSOCIATION STUDIES; IGNOROME; μCT; QUANTITATIVE TRAIT LOCUS; SEX DIFFERENCE; SYSTEMS GENETICS; TRABECULAR BONE

Identifiers

PMID31844829
PMCPMC6894729
OpenAlexW2978378505

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.