Evidence map›Paper›PMID 31923921›Full record

ArticlePloS one2020

iTRAQ proteomics reveals the regulatory response to Magnaporthe oryzae in durable resistant vs. susceptible rice genotypes.

Zuobin Ma, Lili Wang, Mingzhu Zhao, Shuang Gu, Changhua Wang, Jiaming Zhao, Zhiqiang Tang, Hong Gao, Liying Zhang, Liang Fu and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. iTRAQ based proteomic analysis of rice lines having single or stacked blast resistance genes:Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. How do plants defend themselves against pathogens-Biochemical mechanisms and genetic interventions.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Review
  9. Article
  10. iTRAQ-Based Proteomics Analysis of Response toInternational journal of molecular sciences · 2021
    Article
  11. Review
  12. Review
  13. Review
  14. Integrated Analysis of MicroRNA and Target Genes inFrontiers in plant science · 2021
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Zuobin MaRice Research Institute of Shenyang Agriculture University, Shenyang, China.
Lili WangRice Research Institute of Shenyang Agriculture University, Shenyang, China.
Mingzhu ZhaoRice Research Institute of Shenyang Agriculture University, Shenyang, China.
Shuang GuRice Research Institute of Shenyang Agriculture University, Shenyang, China.
Changhua WangRice Research Institute of Liaoning Province, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Jiaming ZhaoSorghum Research Institute of Liaoning Province, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Zhiqiang TangRice Research Institute of Liaoning Province, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Hong GaoRice Research Institute of Liaoning Province, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Liying ZhangRice Research Institute of Liaoning Province, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Liang FuRice Research Institute of Liaoning Province, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Yongan YinXinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi, Xinjiang, China.
Na HeRice Research Institute of Liaoning Province, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Wenjing ZhengRice Research Institute of Liaoning Province, Liaoning Academy of Agricultural Sciences, Shenyang, China.ORCID 0000-0001-8692-7090
Zhengjin XuRice Research Institute of Shenyang Agriculture University, Shenyang, China.
Rice Research Institute · CNChinese Academy of Sciences · CNLiaoning Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice blast disease caused by Magnaporthe oryzae (M. oryzae) is one of the most serious diseases. Although previous research using two-dimensional gel-based proteomics to assess the proteins related to the rice blast resistance had been done, few proteins were identified. Here, we used the iTRAQ method to detect the differentially expressed proteins (DEPs) in the durable resistant rice variety Gangyuan8 (GY8) and the susceptible rice variety Lijiangxintuanheigu (LTH) in response to M. oryzae invasion, and then transcriptome sequencing was used to assist analysis A total of 193 and 672 DEPs were specifically identified in GY8 and LTH, respectively, with only 46 similarly expressed DEPs being shared by GY8 and LTH.39 DEPs involved in plant-pathogen interaction, plant hormone signal transduction, fatty acid metabolism and peroxisome biosynthesis were significantly different between compatible interaction (LTH) and incompatible interaction (GY8). Some proteins participated in peroxide signal transduction and biosynthesis was down-regulated in GY8 but up-regulated in LTH. A lot of genes encoding pathogenesis-related gene (PR), such as chitinase and glucanase, were significantly up-regulated at both the transcriptome and proteome levels at 24 hours post-inoculation in GY8, but up-regulated at the transcriptome level and down-regulated at the proteome level in LTH. Our study reveals that the pathogen-associated molecular pattern (PAMP)-triggered immunity defense system may be activated at the transcriptome level but was inhibited at the protein level in susceptible rice varieties after inoculation. The results may facilitate future studies of the molecular mechanisms of rice blast resistance.

Indexed as

Chromatography, High Pressure LiquidChromatography, Ion ExchangeDisease ResistanceGene Expression Regulation, PlantGenotypeHost-Pathogen InteractionsMagnaportheOryzaPlant DiseasesPlant ProteinsProtein Interaction MapsProtein Serine-Threonine KinasesProteomeProteomicsSpectrometry, Mass, Electrospray IonizationPlant ProteinsProtein Serine-Threonine KinasesProteome

Identifiers

PMID31923921
PMCPMC6954073
OpenAlexW2999289224

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.