Evidence map›Paper›PMID 31943010›Full record

ArticleHuman molecular genetics2020

Effects of flanking sequences and cellular context on subcellular behavior and pathology of mutant HTT.

Anjalika Chongtham, Douglas J Bornemann, Brett A Barbaro, Tamas Lukacsovich, Namita Agrawal, Adeela Syed, Shane Worthge, Judith Purcell, John Burke, Theodore M Chin and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Decoding Nucleotide Repeat Expansion Diseases: Novel Insights fromInternational journal of molecular sciences · 2024
    Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Anjalika ChongthamDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
Douglas J BornemannDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
Brett A BarbaroDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
Tamas LukacsovichDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
Namita AgrawalDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
Adeela SyedDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
Shane WorthgeDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
Judith PurcellDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
John BurkeDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
Theodore M ChinDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, 91125.
J Lawrence MarshDepartment of Developmental and Cell Biology, University of California Irvine, Irvine, CA, 92697-2300, USA.
University of California, Irvine · USCalifornia Institute of Technology · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
NCI NIH HHS P30 CA062203NIH HHS P40 OD018537
6 · The paper itself

Abstract

Huntington's disease (HD) is caused by an expansion of a poly glutamine (polyQ) stretch in the huntingtin protein (HTT) that is necessary to cause pathology and formation of HTT aggregates. Here we ask whether expanded polyQ is sufficient to cause pathology and aggregate formation. By addressing the sufficiency question, one can identify cellular processes and structural parameters that influence HD pathology and HTT subcellular behavior (i.e. aggregation state and subcellular location). Using Drosophila, we compare the effects of expressing mutant full-length human HTT (fl-mHTT) to the effects of mutant human HTTexon1 and to two commonly used synthetic fragments, HTT171 and shortstop (HTT118). Expanded polyQ alone is not sufficient to cause inclusion formation since full-length HTT and HTTex1 with expanded polyQ are both toxic although full-length HTT remains diffuse while HTTex1 forms inclusions. Further, inclusions are not sufficient to cause pathology since HTT171-120Q forms inclusions but is benign and co-expression of HTT171-120Q with non-aggregating pathogenic fl-mHTT recruits fl-mHTT to aggregates and rescues its pathogenicity. Additionally, the influence of sequences outside the expanded polyQ domain is revealed by finding that small modifications to the HTT118 or HTT171 fragments can dramatically alter their subcellular behavior and pathogenicity. Finally, mutant HTT subcellular behavior is strongly modified by different cell and tissue environments (e.g. fl-mHTT appears as diffuse nuclear in one tissue and diffuse cytoplasmic in another but toxic in both). These observations underscore the importance of cellular and structural context for the interpretation and comparison of experiments using different fragments and tissues to report the effects of expanded polyQ.

Indexed as

MutationAnimalsAnimals, Genetically ModifiedCell NucleusDrosophila melanogasterFemaleHumansHuntingtin ProteinHuntington DiseaseInclusion BodiesMaleNeuronsPeptidesTracheaHTT protein, humanHuntingtin ProteinPeptidespolyglutamine

Identifiers

PMID31943010
PMCPMC7608755
OpenAlexW3000505702

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.