Evidence map›Paper›PMID 31964914›Full record

ArticleScientific reports2020

CRL4-Cereblon complex in Thalidomide Embryopathy: a translational investigation.

Thayne Woycinck Kowalski, Julia do Amaral Gomes, Gabriela Barreto Caldas Garcia, Lucas Rosa Fraga, Vanessa Rodrigues Paixao-Cortes, Mariana Recamonde-Mendoza, Maria Teresa Vieira Sanseverino, Lavinia Schuler-Faccini, Fernanda Sales Luiz Vianna

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Thayne Woycinck KowalskiPostgraduate Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil. thaynewk@gmail.com.ORCID http://orcid.org/0000-0001-5799-2272
Julia do Amaral GomesPostgraduate Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.ORCID http://orcid.org/0000-0002-0674-0494
Gabriela Barreto Caldas GarciaPostgraduate Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.
Lucas Rosa FragaLaboratory of Medical and Population Genetics, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.
Vanessa Rodrigues Paixao-CortesInstitute of Biology, Universidade Federal da Bahia (UFBA), Salvador, Brazil.
Mariana Recamonde-MendozaInstitute of Informatics, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.ORCID http://orcid.org/0000-0003-2800-1032
Maria Teresa Vieira SanseverinoPostgraduate Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.
Lavinia Schuler-FacciniPostgraduate Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil.
Fernanda Sales Luiz ViannaPostgraduate Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul (UFRGS), Porto Alegre, Brazil. fslvianna@gmail.com.ORCID http://orcid.org/0000-0001-6339-4869
Universidade Federal do Rio Grande do Sul · BRUniversidade Federal da Bahia · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Cereblon-CRL4 complex has been studied predominantly with regards to thalidomide treatment of multiple myeloma. Nevertheless, the role of Cereblon-CRL4 in Thalidomide Embryopathy (TE) is still not understood. Not all embryos exposed to thalidomide develop TE, hence here we evaluate the role of the CRL4-Cereblon complex in TE variability and susceptibility. We sequenced CRBN, DDB1, CUL4A, IKZF1, and IKZF3 in individuals with TE. To better interpret the variants, we suggested a score and a heatmap comprising their regulatory effect. Differential gene expression after thalidomide exposure and conservation of the CRL4-Cereblon protein complex were accessed from public repositories. Results suggest a summation effect of Cereblon variants on pre-axial longitudinal limb anomalies, and heatmap scores identify the CUL4A variant rs138961957 as potentially having an effect on TE susceptibility. CRL4-Cereblon gene expression after thalidomide exposure and CLR4-Cereblon protein conservation does not explain the difference in Thalidomide sensitivity between species. In conclusion, we suggest that CRL4-Cereblon variants act through several regulatory mechanisms, which may influence CRL4-Cereblon complex assembly and its ability to bind thalidomide. Human genetic variability must be addressed not only to further understand the susceptibility to TE, but as a crucial element in therapeutics, including in the development of pharmacogenomics strategies.

Indexed as

Adaptor Proteins, Signal TransducingAdolescentAdultChildEmbryo, MammalianEmbryonic DevelopmentFemaleFetal DiseasesGene ExpressionGenetic Predisposition to DiseaseGenetic VariationHumansMaleMiddle AgedProtein BindingReceptors, Interleukin-17Adaptor Proteins, Signal TransducingCRBN protein, humanIL17RB protein, humanReceptors, Interleukin-17ThalidomideUbiquitin-Protein Ligases

Identifiers

PMID31964914
PMCPMC6972723
OpenAlexW3001891081

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.