Evidence map›Paper›PMID 31967545›Full record

ArticleeLife2020

Single cell analysis reveals human cytomegalovirus drives latently infected cells towards an anergic-like monocyte state.

Miri Shnayder, Aharon Nachshon, Batsheva Rozman, Biana Bernshtein, Michael Lavi, Noam Fein, Emma Poole, Selmir Avdic, Emily Blyth, David Gottlieb and 5 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
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  9. A vaccine against cytomegalovirus: how close are we?The Journal of clinical investigation · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Human cytomegalovirus and neonatal infection.Current research in microbial sciences · 2024
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Hematopoietic stem cells and betaherpesvirus latency.Frontiers in cellular and infection microbiology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Miri ShnayderDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Aharon NachshonDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Batsheva RozmanDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Biana BernshteinDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Michael LaviDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Noam FeinDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Emma PooleDepartment of Medicine, Addenbrooke's Hospital, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0003-3904-6121
Selmir AvdicSydney Cellular Therapies Laboratory, Westmead, Sydney, Australia.
Emily BlythSydney Cellular Therapies Laboratory, Westmead, Sydney, Australia.
David GottliebSydney Cellular Therapies Laboratory, Westmead, Sydney, Australia.
Allison AbendrothDiscipline of Infectious Diseases and Immunology, Faculty of Medicine and Health, Charles Perkins Centre, University of Sydney, Sydney, Australia.
Barry SlobedmanDiscipline of Infectious Diseases and Immunology, Faculty of Medicine and Health, Charles Perkins Centre, University of Sydney, Sydney, Australia.ORCID 0000-0002-9431-6094
John SinclairDepartment of Medicine, Addenbrooke's Hospital, University of Cambridge, Cambridge, United Kingdom.
Noam Stern-GinossarDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0003-3583-5932
Michal SchwartzDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID 0000-0001-5442-0201
Weizmann Institute of Science · ILThe University of Sydney · AUUniversity of Cambridge · GBWestmead Hospital · AU

Funding

H2020 European Research Council STG-2014–638142Infect-ERA TANKACYMedical Research Council G0701279Medical Research Council MR/S00081X/1
6 · The paper itself

Abstract

Human cytomegalovirus (HCMV) causes a lifelong infection through establishment of latency. Although reactivation from latency can cause life-threatening disease, our molecular understanding of HCMV latency is incomplete. Here we use single cell RNA-seq analysis to characterize latency in monocytes and hematopoietic stem and progenitor cells (HSPCs). In monocytes, we identify host cell surface markers that enable enrichment of latent cells harboring higher viral transcript levels, which can reactivate more efficiently, and are characterized by reduced intrinsic immune response that is important for viral gene expression. Significantly, in latent HSPCs, viral transcripts could be detected only in monocyte progenitors and were also associated with reduced immune-response. Overall, our work indicates that regardless of the developmental stage in which HCMV infects, HCMV drives hematopoietic cells towards a weaker immune-responsive monocyte state and that this anergic-like state is crucial for the virus ability to express its transcripts and to eventually reactivate.

Indexed as

CytomegalovirusHost-Pathogen InteractionsMonocytesVirus LatencyCell LineHematopoietic Stem CellsHumansImmune ToleranceSequence Analysis, RNASingle-Cell AnalysisTranscriptomecytomegalovirushematopoietic stem and progenitor cellsherpesvirushumaninfectious diseaselatencymicrobiologyreactivationsingle-cell RNA-seq

Identifiers

PMID31967545
PMCPMC7039680
OpenAlexW3001658908

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.