Evidence map›Paper›PMID 32005204›Full record

ArticleBMC psychiatry2020

Stratified analyses of genome wide association study data reveal haplotypes for a candidate gene on chromosome 2 (KIAA1211L) is associated with opioid use in patients of Arabian descent.

Hiba Alblooshi, Habiba Al Safar, Ahmed El Kashef, Hamad Al Ghaferi, Mansour Shawky, Gary K Hulse, Guan K Tay

Open access · goldAbstract read
In one paragraph

Article in BMC psychiatry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Hiba AlblooshiDivision of Psychiatry, the University of Western Australia, Crawley, Western Australia, Australia.
Habiba Al SafarCenter of Biotechnology, Khalifa University of Science and Technology, Abu Dhabi, United Arab Emirates.
Ahmed El KashefNational Rehabilitation Center, Abu Dhabi, United Arab Emirates.
Hamad Al GhaferiNational Rehabilitation Center, Abu Dhabi, United Arab Emirates.
Mansour ShawkyNational Rehabilitation Center, Abu Dhabi, United Arab Emirates.
Gary K HulseDivision of Psychiatry, the University of Western Australia, Crawley, Western Australia, Australia.
Guan K TayDivision of Psychiatry, the University of Western Australia, Crawley, Western Australia, Australia. guantay@bigpond.com.
Abu Dhabi National Oil (United Arab Emirates) · AEKhalifa University of Science and Technology · AEUnited Arab Emirates University · AEUniversity of Western Australia · AU

Funding

National Rehabilitation Center (UAE) 2013/1
6 · The paper itself

Abstract

backgroundGenome Wide Association Studies (GWAS) have been conducted to identify genes and pathways involved in development of opioid use disorder. This study extends the first GWAS of substance use disorder (SUD) patients from the United Arab Emirates (UAE) by stratifying the study group based on opioid use, which is the most common substance of use in this cohort.

methodsThe GWAS cohort consisted of 512 (262 case, 250 controls) male participants from the UAE. The samples were genotyped using the Illumina Omni5 Exome system. Data was stratified according to opioid use using PLINK. Haplotype analysis was conducted using Haploview 4.2.

resultsTwo main associations were identified in this study. Firstly, two SNPs on chromosome 7 were associated with opioid use disorder, rs118129027 (p-value = 1.23 × 10

conclusionThis is the first GWAS to identify candidate genes associated with opioid use disorder in participants from the UAE. The lack of other genetic data of Arabian descent opioid use patients has hindered replication of the findings. Nevertheless, the outcomes implicate new pathways in opioid use disorder that requires further research to assess the role of the identified genes in the development of opioid use disorder.

Indexed as

Genome-Wide Association StudyOpioid-Related DisordersChromosomes, Human, Pair 2Genetic Predisposition to DiseaseGenotypeHaplotypesHumansMaleMicrofilament ProteinsPolymorphism, Single NucleotideUnited Arab EmiratesCRACD protein, humanMicrofilament ProteinsGWAS, stratificationHaplotypesKIAA1211LOpioid use disorder

Identifiers

PMID32005204
PMCPMC6995052
OpenAlexW3009330448

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.