Evidence map›Paper›PMID 32017701›Full record

ArticleeLife2020

A Fyn biosensor reveals pulsatile, spatially localized kinase activity and signaling crosstalk in live mammalian cells.

Ananya Mukherjee, Randhir Singh, Sreeram Udayan, Sayan Biswas, Pothula Purushotham Reddy, Saumya Manmadhan, Geen George, Shilpa Kumar, Ranabir Das, Balaji M Rao and 1 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. A molecular rotor FLIM probe reveals dynamic coupling between mitochondrial inner membrane fluidity and cellular respiration.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Ananya Mukherjee *Institute for Stem Cell Science and Regenerative Medicine, Bangalore, India.ORCID 0000-0002-3112-583X
Randhir Singh *Institute for Stem Cell Science and Regenerative Medicine, Bangalore, India.ORCID 0000-0001-7388-225X
Sreeram UdayanInstitute for Stem Cell Science and Regenerative Medicine, Bangalore, India.ORCID 0000-0003-3778-9968
Sayan BiswasInstitute for Stem Cell Science and Regenerative Medicine, Bangalore, India.ORCID 0000-0003-2515-1940
Pothula Purushotham ReddyNational Centre for Biological Sciences, Bangalore, India.
Saumya ManmadhanInstitute for Stem Cell Science and Regenerative Medicine, Bangalore, India.
Geen GeorgeInstitute for Stem Cell Science and Regenerative Medicine, Bangalore, India.
Shilpa KumarInstitute for Stem Cell Science and Regenerative Medicine, Bangalore, India.
Ranabir DasNational Centre for Biological Sciences, Bangalore, India.ORCID 0000-0001-5114-6817
Balaji M RaoNorth Carolina State University, Raleigh, United States.ORCID 0000-0001-5695-8953
Akash GulyaniInstitute for Stem Cell Science and Regenerative Medicine, Bangalore, India.ORCID 0000-0003-4130-4257
Institute for Stem Cell Biology and Regenerative Medicine · INNational Centre for Biological Sciences · INNorth Carolina State University · US

Funding

Department of Biotechnology, Ministry of Science and Technology BT/IN/BMBF/03/AG/2015-16Department of Biotechnology, Ministry of Science and Technology BT/IN/Denmark/07/RSM/2015-2016Department of Biotechnology, Ministry of Science and Technology DBT-RA Program in Biotechnology and Life SciencesDepartment of Biotechnology, Ministry of Science and Technology Grant BT/PR8071/MED/32/290/2013University Grants Commission JRF-SRF Fellowship
6 · The paper itself

Abstract

Cell behavior is controlled through spatio-temporally localized protein activity. Despite unique and often contradictory roles played by Src-family-kinases (SFKs) in regulating cell physiology, activity patterns of individual SFKs have remained elusive. Here, we report a biosensor for specifically visualizing active conformation of SFK-Fyn in live cells. We deployed combinatorial library screening to isolate a binding-protein (F29) targeting activated Fyn. Nuclear-magnetic-resonance (NMR) analysis provides the structural basis of F29 specificity for Fyn over homologous SFKs. Using F29, we engineered a sensitive, minimally-perturbing fluorescence-resonance-energy-transfer (FRET) biosensor (

Indexed as

Biosensing TechniquesProto-Oncogene Proteins c-fynAnimalsCell LineCell Physiological PhenomenaFluorescence Resonance Energy TransferFluorescent DyesHEK293 CellsHumansMagnetic Resonance SpectroscopyMicePhosphorylationSignal TransductionYeastsFluorescent DyesProto-Oncogene Proteins c-fynbiochemistrybiosensorcell biologychemical biologycompartmentalizedE. coliFRETFyn kinasehumanmousepulsatileS. cerevisiaesrc kinasesvirus

Identifiers

PMID32017701
PMCPMC7000222
OpenAlexW3004621799

What Socratic holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.