Evidence map›Paper›PMID 32068297›Full record

ArticleMolecular microbiology2020

Rapid block of pre-mRNA splicing by chemical inhibition of analog-sensitive CRK9 in Trypanosoma brucei.

Ujwala Gosavi, Ankita Srivastava, Nitika Badjatia, Arthur Günzl

Open access · greenAbstract read
In one paragraph

Article in Molecular microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ujwala GosaviDepartment of Genetics and Genome Sciences, UConn Health, Farmington, CT, USA.
Ankita SrivastavaDepartment of Genetics and Genome Sciences, UConn Health, Farmington, CT, USA.
Nitika BadjatiaDepartment of Genetics and Genome Sciences, UConn Health, Farmington, CT, USA.
Arthur GünzlDepartment of Genetics and Genome Sciences, UConn Health, Farmington, CT, USA.ORCID 0000-0002-7487-2261
UConn Health · US

Funding

TRANSCRIPTION AND RNA PROCESSING IN TRYPANOSOMESR01AI028798 · NIAID · YALE UNIVERSITY · PI TSCHUDI, CHRISTIAN · 1990 to 2020
$10.9M
Gene Expression control by trypanosome cyclin-dependent kinase CRK9R56AI130747 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GUNZL, ARTHUR · 2018 to 2018
$427k
NIAID NIH HHS R01 AI028798NIAID NIH HHS R56 AI130747
6 · The paper itself

Abstract

Trypanosoma brucei CRK9 is an essential cyclin-dependent kinase for the parasite-specific mode of pre-mRNA processing. In trypanosomes, protein coding genes are arranged in directional arrays that are transcribed polycistronically, and individual mRNAs are generated by spliced leader trans-splicing and polyadenylation, processes that are functionally linked. Since CRK9 silencing caused a decline of mRNAs, a concomitant increase of unspliced pre-mRNAs and the disappearance of the trans-splicing Y structure intermediate, CRK9 is essential for the first step of splicing. CRK9 depletion also caused a loss of phosphorylation in RPB1, the largest subunit of RNA polymerase (pol) II. Here, we established cell lines that exclusively express analog-sensitive CRK9 (CRK9

Indexed as

Cyclin-Dependent KinasesPhosphorylationPolyadenylationProtein Kinase InhibitorsPyrazolesPyrimidinesRNA, MessengerRNA Polymerase IIRNA PrecursorsRNA SplicingTranscription, GeneticTrypanosoma brucei brucei1NMPP1 compoundCyclin-Dependent KinasesProtein Kinase InhibitorsPyrazolesPyrimidinesRNA, MessengerRNA Polymerase IIRNA Precursorsanalog-sensitive kinasechemical enzyme inhibitioncyclin-dependent kinasepre-mRNA processingpre-mRNA splicing

Identifiers

PMID32068297
PMCPMC7299817
OpenAlexW3007525627

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.