Evidence map›Paper›PMID 32077931›Full record

ArticleHuman molecular genetics2020

Genome-wide assessment of genetic risk for systemic lupus erythematosus and disease severity.

Lingyan Chen, Yong-Fei Wang, Lu Liu, Adrianna Bielowka, Rahell Ahmed, Huoru Zhang, Phil Tombleson, Amy L Roberts, Christopher A Odhams, Deborah S Cunninghame Graham and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed, 1 pooled it
10.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 1 synthesis or guideline pooled it, 98 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Contemporary Perspectives on Chronic Renal Disorders.Chronic diseases and translational medicine · 2025
    Review
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. [Update on lupus nephritis].Zeitschrift fur Rheumatologie · 2024
    Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 3 countries.

Lingyan ChenDepartment of Medical and Molecular Genetics, King's College London, London, UK.
Yong-Fei WangDepartment of Paediatrics and Adolescent Medicine, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Lu LiuDepartment of Dermatology, NO. 1 Hospital, Anhui Medical University, Hefei, Anhui, China.
Adrianna BielowkaDepartment of Medical and Molecular Genetics, King's College London, London, UK.
Rahell AhmedDepartment of Medical and Molecular Genetics, King's College London, London, UK.
Huoru ZhangDepartment of Paediatrics and Adolescent Medicine, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Phil TomblesonDepartment of Medical and Molecular Genetics, King's College London, London, UK.
Amy L RobertsDepartment of Medical and Molecular Genetics, King's College London, London, UK.
Christopher A OdhamsDepartment of Medical and Molecular Genetics, King's College London, London, UK.
Deborah S Cunninghame GrahamDepartment of Medical and Molecular Genetics, King's College London, London, UK.
Xuejun ZhangDepartment of Dermatology, NO. 1 Hospital, Anhui Medical University, Hefei, Anhui, China.
Wanling YangDepartment of Paediatrics and Adolescent Medicine, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Timothy J VyseDepartment of Medical and Molecular Genetics, King's College London, London, UK.
David L MorrisDepartment of Medical and Molecular Genetics, King's College London, London, UK.
King's College London · GBUniversity of Hong Kong · HKAnhui Medical University · CN

Funding

Department of HealthMedical Research Council MR/M01665X/1Versus Arthritis 20265Versus Arthritis 20332Versus Arthritis 20580
6 · The paper itself

Abstract

Using three European and two Chinese genome-wide association studies (GWAS), we investigated the performance of genetic risk scores (GRSs) for predicting the susceptibility and severity of systemic lupus erythematosus (SLE), using renal disease as a proxy for severity. We used four GWASs to test the performance of GRS both cross validating within the European population and between European and Chinese populations. The performance of GRS in SLE risk prediction was evaluated by receiver operating characteristic (ROC) curves. We then analyzed the polygenic nature of SLE statistically. We also partitioned patients according to their age-of-onset and evaluated the predictability of GRS in disease severity in each age group. We found consistently that the best GRS in the prediction of SLE used SNPs associated at the level of P < 1e-05 in all GWAS data sets and that SNPs with P-values above 0.2 were inflated for SLE true positive signals. The GRS results in an area under the ROC curve ranging between 0.64 and 0.72, within European and between the European and Chinese populations. We further showed a significant positive correlation between a GRS and renal disease in two independent European GWAS (Pcohort1 = 2.44e-08; Pcohort2 = 0.00205) and a significant negative correlation with age of SLE onset (Pcohort1 = 1.76e-12; Pcohort2 = 0.00384). We found that the GRS performed better in the prediction of renal disease in the 'later onset' compared with the 'earlier onset' group. The GRS predicts SLE in both European and Chinese populations and correlates with poorer prognostic factors: young age-of-onset and lupus nephritis.

Indexed as

Genetic Predisposition to DiseaseGenome-Wide Association StudyAdultCase-Control StudiesFemaleGenotypeHumansLupus Erythematosus, SystemicMaleMiddle AgedMultifactorial InheritancePolymorphism, Single NucleotideRisk FactorsSeverity of Illness IndexWhite People

Identifiers

PMID32077931
PMCPMC7322569
OpenAlexW3006693740

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.