Evidence map›Paper›PMID 32080893›Full record

SynthesisClinical transplantation2020

Genome-wide association study for time to failure of kidney transplants from African American deceased donors.

Jasmin Divers, Lijun Ma, William Mark Brown, Nicholette D Palmer, Young Choi, Ajay K Israni, Stephen O Pastan, Bruce A Julian, Robert S Gaston, Pamela J Hicks and 2 more

Open access · greenAbstract readMeta-Analysis
In one paragraph

Synthesis in Clinical transplantation, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Novel Aspects of Immunogenetics and Post-Transplant Events in Kidney Transplantation.Transplant international : official journal of the European Society for Organ Transplantation · 2024
    Review
  5. Novel Therapies inKidney international reports · 2023
    Review
  6. KiT-GENIE, the French genetic biobank of kidney transplantation.European journal of human genetics : EJHG · 2023
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Apolipoprotein L1: role in the evaluation of kidney transplant donors.Current opinion in nephrology and hypertension · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Jasmin DiversDivision of Health Services Research, Department of Foundations of Medicine, NYU Long Island School of Medicine and NYU Winthrop Research Institute, Mineola, NY, USA.ORCID 0000-0003-0120-7620
Lijun MaDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, NC, USA.
William Mark BrownDepartment of Biostatistics and Data Science, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Nicholette D PalmerDepartment of Biochemistry, Wake Forest School of Medicine, Winston-Salem, NC, USA.ORCID 0000-0001-8883-2511
Young ChoiDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Ajay K IsraniDepartment of Medicine, Hennepin Healthcare, University of Minnesota, Minneapolis, MN, USA.ORCID 0000-0002-7607-0430
Stephen O PastanDepartment of Medicine, Emory University School of Medicine, Atlanta, GA, USA.
Bruce A JulianUniversity of Alabama at Birmingham School of Medicine, Birmingham, AL, USA.ORCID 0000-0001-5781-1021
Robert S GastonUniversity of Alabama at Birmingham School of Medicine, Birmingham, AL, USA.
Pamela J HicksDepartment of Biochemistry, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Amber M Reeves-DanielDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Barry I FreedmanDepartment of Internal Medicine, Section on Nephrology, Wake Forest School of Medicine, Winston-Salem, NC, USA.ORCID 0000-0003-0275-5530
Wake Forest University · USUniversity of Alabama at Birmingham · USEmory University · USUniversity of Minnesota · USWinthrop-University Hospital · US

Funding

Pharmacogenomics of Immune Suppressants in Kidney TransplantationU19AI070119 · NIAID · UNIVERSITY OF MINNESOTA · PI MATAS, ARTHUR J · 2006 to 2016
$17.1M
Genetic Analysis of African American Hypertensive End-Stage Renal DiseaseR01DK070941 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 2006 to 2015
$4.7M
Gut Microbiota and Effect on Immune Suppressants in TransplantationR01AI140303 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI ISRANI, AJAY K, JACOBSON, PAMALA A · 2019 to 2024
$3.6M
Natural History of MYH9-Associated NephropathyR01DK084149 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI FREEDMAN, BARRY IRA · 2009 to 2012
$2.3M
Wake Forest Collaborative Application for an APOLLO Clinical CenterU01DK116040 · NIDDK · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI BARRY Ira FREEDMAN, Rasheed Adebayo Gbadegesin · 2017 to 2026
$2.2M
Genetic Determinants of Renal Transplant Survival from African American DonorsR01MD009055 · NIMHD · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI DIVERS, JASMIN, FREEDMAN, BARRY IRA · 2014 to 2018
$2.0M
NIAID NIH HHS R01 AI140303NIAID NIH HHS U19 AI070119NIDDK NIH HHS R01 DK070941NIDDK NIH HHS R01 DK084149NIDDK NIH HHS U01 DK116040NIMHD NIH HHS R01 MD009055
6 · The paper itself

Abstract

Two renal-risk variants in the apolipoprotein L1 gene (APOL1) in African American (AA) deceased donors (DD) are associated with shorter renal allograft survival after transplantation. To identify additional genes contributing to allograft survival, a genome-wide association study was performed in 532 AA DDs. Phenotypic data were obtained from the Scientific Registry of Transplant Recipients. Association and single-nucleotide polymorphism (SNP)-by-APOL1 interaction tests were conducted using death-censored renal allograft survival accounting for relevant covariates. Replication and inverse-variance-weighted meta-analysis were performed using data from 250 AA DD in the Genomics of Transplantation study. Accounting for APOL1, multiple SNPs near the Nudix Hydrolase 7 gene (NUDT7) showed strong independent effects (P = 1.6 × 10

Indexed as

Apolipoprotein L1Kidney TransplantationBlack or African AmericanGenome-Wide Association StudyGraft RejectionHumansLipoproteins, HDLAPOL1 protein, humanApolipoprotein L1Lipoproteins, HDLAfrican AmericansAPOL1chronic kidney diseasegenome-wide association studygraft failurekidney transplantation

Identifiers

PMID32080893
PMCPMC7694574
OpenAlexW3008946578

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.