Evidence map›Paper›PMID 32080977›Full record

ArticleChemical biology & drug design2020

Computational-based discovery of FAK FERM domain chemical probes that inhibit HER2-FAK cancer signaling.

Erik Stahl, Rohini Nott, Karissa Koessel, William Cance, Timothy Marlowe

Open access · greenAbstract read
In one paragraph

Article in Chemical biology & drug design, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. New Insights on the Nuclear Functions and Targeting of FAK in Cancer.International journal of molecular sciences · 2022
    Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Erik StahlUniversity of Arizona Cancer Center - Phoenix, Phoenix, AZ, USA.ORCID 0000-0002-7593-4823
Rohini NottUniversity of Arizona Cancer Center - Phoenix, Phoenix, AZ, USA.
Karissa KoesselUniversity of Arizona College of Pharmacy-Phoenix, Phoenix, AZ, USA.
William CanceUniversity of Arizona Cancer Center - Phoenix, Phoenix, AZ, USA.
Timothy MarloweUniversity of Arizona Cancer Center - Phoenix, Phoenix, AZ, USA.
University of Arizona · US

Funding

FOCAL ADHESION KINASE--TUMOR BIOLOGY AND THERAPEUTICSR01CA065910 · NCI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI MARLOWE, TIMOTHY A · 1996 to 2019
$6.3M
NCI NIH HHS R01 CA065910
6 · The paper itself

Abstract

The N-terminal FERM domain of focal adhesion kinase (FAK) contributes to FAK scaffolding and interacts with HER2, an oncogene and receptor tyrosine kinase. The interaction between HER2 and FAK drives resistance to FAK-kinase domain inhibitors through FAK Y397 transphosphorylation and FAK re-activation upon inhibition. As such, FAK FERM remains an attractive drug discovery target. In this report, we detail an alternative approach to targeting FAK through virtual screening-based discovery of chemical probes that target FAK FERM. We validated the binding interface between HER2 and FAK using site-directed mutagenesis and GST pull-down experiments. We assessed the ligandability of key-binding residues of HER2 and FAK utilizing computational tools. We developed a virtual screening method to screen ~200,000 compounds against the FAK FERM domain, identifying 20 virtual chemical probes. We performed GST pull-down screening on these compounds, discovering two hits, VS4 and VS14, with nanomolar IC

Indexed as

Amino Acid SequenceErb-b2 Receptor Tyrosine KinasesFERM DomainsFocal Adhesion Protein-Tyrosine KinasesHumansLigandsMolecular Docking SimulationMutagenesisNeoplasmsPhosphorylationProtein BindingSignal TransductionSmall Molecule LibrariesErb-b2 Receptor Tyrosine KinasesFocal Adhesion Protein-Tyrosine KinasesLigandsSmall Molecule LibrariesFAK FERM domainfocal adhesion kinaseHER2high-throughput screeningphosphorylationvirtual screening

Identifiers

PMID32080977
PMCPMC9590610
OpenAlexW3008451784

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.