Evidence map›Paper›PMID 32152226›Full record

ArticleThe Journal of biological chemistry2020

The HIV-1 capsid-binding host factor CPSF6 is post-transcriptionally regulated by the cellular microRNA miR-125b.

Evan Chaudhuri, Sabyasachi Dash, Muthukumar Balasubramaniam, Adrian Padron, Joseph Holland, Gregory A Sowd, Fernando Villalta, Alan N Engelman, Jui Pandhare, Chandravanu Dash

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Evan ChaudhuriCenter for AIDS Health Disparities Research, Meharry Medical College, Nashville, Tennessee 37208.
Sabyasachi DashCenter for AIDS Health Disparities Research, Meharry Medical College, Nashville, Tennessee 37208.
Muthukumar BalasubramaniamCenter for AIDS Health Disparities Research, Meharry Medical College, Nashville, Tennessee 37208.
Adrian PadronDepartment of Biochemistry, Cancer Biology, Pharmacology and Neuroscience, Meharry Medical College, Nashville, Tennessee 37208.ORCID 0000-0002-2142-0501
Joseph HollandCenter for AIDS Health Disparities Research, Meharry Medical College, Nashville, Tennessee 37208.
Gregory A SowdDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215.
Fernando VillaltaCenter for AIDS Health Disparities Research, Meharry Medical College, Nashville, Tennessee 37208.
Alan N EngelmanDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215.ORCID 0000-0002-9709-2591
Jui PandhareCenter for AIDS Health Disparities Research, Meharry Medical College, Nashville, Tennessee 37208.
Chandravanu DashCenter for AIDS Health Disparities Research, Meharry Medical College, Nashville, Tennessee 37208 cdash@mmc.edu.ORCID 0000-0003-4466-8355
Meharry Medical College · USHarvard University · US

Funding

The RCMI Program in Health Disparities Research at Meharry Medical College - SupplementU54MD007586 · NIMHD · MEHARRY MEDICAL COLLEGE · PI SANIKA SAMUEL CHIRWA · 2017 to 2026
$48.2M
X-Ray Core P50GM082251 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI AHN, JINWOO · 2007 to 2018
$48.1M
Tennessee CFAR: Implementation of Culturally Responsive Trauma-Informed Care with Youth with HIV in Memphis, TNP30AI110527 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI John Koethe · 2015 to 2026
$27.5M
Technologies and Resources CoreU54MD007593 · NIMHD · MEHARRY MEDICAL COLLEGE · PI ADUNYAH, SAMUEL EVANS · 2012 to 2018
$24.7M
Technology Development 2: MAS NMR and dynamic nuclear polarization for HIV-1 structural biologyP50AI150481 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI XIONG, YONG · 2019 to 2021
$14.1M
Nuclear Localization of HIV-1 Preintegration ComplexesR01AI052014 · NIAID · DANA-FARBER CANCER INSTITUTE · PI ENGELMAN, ALAN N. · 2003 to 2025
$11.4M
MOLECULAR BASIS OF VIRAL INFECTIVITYT32AI007245 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Aaron Gregory Schmidt · 1985 to 2026
$11.3M
MOLECULAR PARASITOLOGY TRAINING PROGRAMT32AI007281 · NIAID · MEHARRY MEDICAL COLLEGE · PI NDE, PIUS N · 1985 to 2025
$3.2M
Methamphetamine Research Program at Meharry Medical CollegeR24DA036420 · NIDA · MEHARRY MEDICAL COLLEGE · PI CHARLTON, CLIVEL G. · 2014 to 2018
$2.3M
Role of the Viral Capsid in HIV-1 IntegrationR01AI136740 · NIAID · MEHARRY MEDICAL COLLEGE · PI Chandravanu Dash · 2019 to 2026
$2.2M
Methamphetamine Research Program at Meharry Medical CollegeR24DA021471 · NIDA · MEHARRY MEDICAL COLLEGE · PI RUCKER, HUBERT K. · 2008 to 2012
$2.0M
Role of the Viral Capsid in HIV-1 Integration.R56AI122960 · NIAID · MEHARRY MEDICAL COLLEGE · PI DASH, CHANDRAVANU · 2016 to 2016
$376k
NIAID NIH HHS P30 AI110527NIAID NIH HHS P50 AI150481NIAID NIH HHS R01 AI052014NIAID NIH HHS R01 AI136740NIAID NIH HHS R56 AI122960NIAID NIH HHS T32 AI007245NIAID NIH HHS T32 AI007281NIDA NIH HHS R24 DA021471NIDA NIH HHS R24 DA036420NIGMS NIH HHS P50 GM082251NIMHD NIH HHS U54 MD007586NIMHD NIH HHS U54 MD007593
6 · The paper itself

Abstract

Cleavage and polyadenylation specificity factor 6 (CPSF6) is a cellular protein involved in mRNA processing. Emerging evidence suggests that CPSF6 also plays key roles in HIV-1 infection, specifically during nuclear import and integration targeting. However, the cellular and molecular mechanisms that regulate CPSF6 expression are largely unknown. In this study, we report a post-transcriptional mechanism that regulates CPSF6 via the cellular microRNA miR-125b. An

Indexed as

3' Untranslated RegionsBinding SitesCapsidHIV-1HIV InfectionsHumansMicroRNAsmRNA Cleavage and Polyadenylation FactorsMutationVirus Integration3' Untranslated Regionscleavage factor Im, humanMicroRNAsMIRN125 microRNA, humanmRNA Cleavage and Polyadenylation Factors3′UTRcleavage and polyadenylation specificity factor 6 (CPSF6)epigeneticsHIVhost-pathogen interactionhuman immunodeficiency virus (HIV)microRNA (miRNA)miR-125bmiRNA biogenesispost-transcriptional regulationRNA binding protein

Identifiers

PMID32152226
PMCPMC7152771
OpenAlexW3011809885

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.